Factsheet for TraesCS4B01G328200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G461800.1
TraesCS2A01G461900.1
TraesCS2B01G483400.1
TraesCS2B01G483500.1
TraesCS2D01G462000.1
TraesCS2D01G462100.1
TraesCS3A01G245000.1
TraesCS3A01G490100.1
TraesCS3B01G275000.1
TraesCS3B01G550900.1
TraesCS3B01G551200.1
TraesCS3D01G246500.1
TraesCS3D01G496100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	TraesCS3A01G245000.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3A01G490100.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3B01G275000.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3B01G550900.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3B01G551200.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3D01G246500.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3D01G496100.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS2A01G461800.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2A01G461900.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2B01G483400.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2B01G483500.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2D01G462000.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2D01G462100.1	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G325200.1	Wheat	plastid	97.13	97.5
TraesCS5A01G500000.1	Wheat	plastid	97.51	97.33
HORVU4Hr1G081600.1	Barley	mitochondrion, plastid	94.84	96.31
Zm00001d048345_P003	Maize	plastid	83.94	86.08
GSMUA_Achr11P...	Banana	cytosol	55.83	85.88
Zm00001d027523_P001	Maize	plasma membrane	82.98	84.77
Os03t0132800-01	Rice	plasma membrane	86.04	84.75
EER95565	Sorghum	plastid	83.56	84.69
TraesCS1B01G217500.1	Wheat	plastid	83.17	82.7
GSMUA_Achr5P11610_001	Banana	cytosol	76.67	79.88
VIT_03s0038g03270.t01	Wine grape	cytosol	74.19	77.6
GSMUA_Achr4P29650_001	Banana	cytosol	74.19	77.29
GSMUA_Achr5P19040_001	Banana	plasma membrane	76.67	76.97
CDX69121	Canola	cytosol	73.42	75.89
CDX75483	Canola	cytosol	73.04	74.9
KRH14029	Soybean	cytosol	71.13	74.85
Bra011596.1-P	Field mustard	cytosol	73.23	74.8
AT4G35230.1	Thale cress	cytosol	73.23	74.8
CDX76321	Canola	cytosol	72.47	74.75
Bra020806.1-P	Field mustard	cytosol	72.47	74.75
CDY17529	Canola	cytosol	72.08	74.36
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	72.47	73.88
KRH74087	Soybean	mitochondrion	71.89	73.87
TraesCS1B01G192300.3	Wheat	cytosol	58.51	60.47
TraesCS2B01G604300.1	Wheat	mitochondrion	55.64	58.91
TraesCS7B01G228900.2	Wheat	cytosol	54.88	57.63
GSMUA_Achr1P02160_001	Banana	cytosol	57.36	55.35
TraesCS5B01G500800.1	Wheat	mitochondrion	48.76	52.04
Bra034987.1-P	Field mustard	cytosol	13.77	44.44

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	MapMan:26.8.1.1.4	Gene3D:3.30.200.20
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011990
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom
SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS4B01G328200	EnsemblPlants:TraesCS4B01G328200.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:619075288..619079876

Molecular Weight (calculated)

58305.2 Da

IEP (calculated)

6.457

GRAVY (calculated)

-0.513

Length

523 amino acids

Sequence
(BLAST)

001: MGCCRSSLRA VTHPHPEKPP GAGAGAAPAR RPSFSASAHQ AAPAPAASAS SSESEAGFAE FSLAELRAAT GGFAAENIVS ESGDKAPNFV YRGRLQQHGQ
101: GPRRAIAVKK FGKMAWPDPK QFAEEARGVG RLRHRRLANL IGYCCDGDER LLVAEFMPND TLAKHVFHWE NQTIEWAMRL RVAYHIAEAL DYCSNEGRPL
201: YHDLNAYRVL FDENGDPRLS CFGLMKNSRD GKSYSTNLAY TPPEYLRTGR VTPESVIFSF GTVLLDLLSG KRIPPSHALD MMRGNNIQML MDSHLEGNYS
301: TEEATALVDL ASQCLQYEAR DRPNTKKLVT ILEPLQTKLE VPSYEMLGIP KHEEEVPPPP PPAPQPPQHP LSPMAEACSR MDLTAIQQIL VSTHYRDDEG
401: SNELSFQEWT QQMRDMLDAR KRGDLAFRDK DFKTAIECYT QFVDVGTMVS PTVYARRSLC HLMCDQPDAA LRDAMQAQCV YPDWPTAFYM QAVALSKLDM
501: QSDAKDMLSE ASQLEEKKQK NSR

Best Arabidopsis Sequence Match ( AT4G35230.1 )
(BLAST)

001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS

Arabidopsis Description

BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.