Factsheet for GSMUA_Achr4P29650_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P05250_001
GSMUA_Achr4P08920_001
GSMUA_Achr6P19930_001
GSMUA_Achr6P35950_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	GSMUA_Achr1P05250_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr4P08920_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr6P35950_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_AchrUn_...	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr6P19930_001	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P11610_001	Banana	cytosol	89.64	89.64
GSMUA_Achr11P...	Banana	cytosol	59.36	87.65
Os10t0542800-01	Rice	cytosol, plasma membrane	17.73	86.41
GSMUA_Achr5P19040_001	Banana	plasma membrane	84.26	81.19
Zm00001d048345_P003	Maize	plastid	79.28	78.04
VIT_03s0038g03270.t01	Wine grape	cytosol	77.49	77.8
HORVU1Hr1G052420.3	Barley	cytosol	39.04	77.47
Zm00001d027523_P001	Maize	plasma membrane	78.29	76.76
EER95565	Sorghum	plastid	78.69	76.55
HORVU4Hr1G081600.1	Barley	mitochondrion, plastid	77.29	75.34
CDX69121	Canola	cytosol	75.9	75.3
AT4G35230.1	Thale cress	cytosol	76.69	75.2
CDY17529	Canola	cytosol	75.9	75.15
CDX75483	Canola	cytosol	76.1	74.9
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	76.49	74.85
Bra011596.1-P	Field mustard	cytosol	76.29	74.8
CDX76321	Canola	cytosol	75.5	74.75
Bra020806.1-P	Field mustard	cytosol	75.5	74.75
TraesCS1A01G203400.1	Wheat	plastid	77.89	74.62
KRH14029	Soybean	cytosol	73.71	74.45
Os03t0132800-01	Rice	plasma membrane	78.69	74.39
TraesCS1B01G217500.1	Wheat	plastid	77.89	74.33
TraesCS4D01G325200.1	Wheat	plastid	77.09	74.28
TraesCS5A01G500000.1	Wheat	plastid	77.49	74.24
TraesCS1D01G206900.1	Wheat	plastid	77.89	74.19
TraesCS4B01G328200.1	Wheat	plastid	77.29	74.19
KRH74087	Soybean	mitochondrion	74.3	73.28
EER94565	Sorghum	plastid	75.7	72.52
HORVU0Hr1G000450.1	Barley	plastid	39.64	71.07
HORVU1Hr1G052350.2	Barley	plastid	77.89	69.33
Zm00001d029785_P001	Maize	plastid	74.7	67.33
GSMUA_Achr1P15240_001	Banana	cytosol	58.17	59.35
GSMUA_Achr1P02160_001	Banana	cytosol	63.74	59.04
GSMUA_Achr11P...	Banana	cytosol	57.17	58.33
GSMUA_Achr4P12250_001	Banana	cytosol	57.37	57.6
GSMUA_Achr10P...	Banana	mitochondrion, plastid	56.57	57.26
GSMUA_Achr8P02400_001	Banana	plastid	55.98	57.23
GSMUA_Achr4P05600_001	Banana	cytosol	55.98	57.23
Bra034987.1-P	Field mustard	cytosol	15.54	48.15
OQU78897	Sorghum	cytosol, golgi, plastid	28.88	39.19

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	MapMan:26.8.1.1.4	Gene3D:3.30.200.20
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G29650_001	EnsemblPlants:GSMUA_Achr4P29650_001	EnsemblPlants:GSMUA_Achr4T29650_001
InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	UniProt:M0ST77	PFAM:PF07714	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002952195	SEG:seg	:	:	:

Description

Probable serine/threonine-protein kinase At4g35230 [Source:GMGC_GENE;Acc:GSMUA_Achr4G29650_001]

Coordinates

chr4:+:27535314..27543103

Molecular Weight (calculated)

56911.7 Da

IEP (calculated)

6.779

GRAVY (calculated)

-0.504

Length

502 amino acids

Sequence
(BLAST)

001: MGSCWSYFRQ ESHPAEKRSY QSQPQQRRLS LSLNQAAAEG GGREVPAFSQ FSFAELKAAT DGFSPQNIVS ESGDKAPNVV YKGRLQNRRR IVVKKFARTA
101: WPDPKQFAEE AWGAGKLRHR RLANLIGYCC DGEERLLVAE YMPNDTLAKH LFHWENQSIE WAMRLKIAFC IAEALEYCSN QGWPLYHDLN AYRVLFDEGG
201: DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VIYSFGTVLL DLLSGKRIPP SHALDMIRGK NILVLMDSHL EGNFSTEEAT TLVDLASQCL
301: QFEPRDRPNT KKLVATLGPL QTKSEVPSHT MLGAEMHGEA PPAPQQPFSR MGEACSRMDL TAIHEILVMT HYRDDEVTNE LSFQEWTQQM RDMLEARKRG
401: DFAFRDKDFK TAIECYSQFL DVGTMASPTV YARRSLCHLM CDQADAALRD AMQAQCLYPD WPTAFYMQAV ALAKLNMQSD SLDMLQEATM LEEKRQKSGR
501: GP

Best Arabidopsis Sequence Match ( AT4G35230.1 )
(BLAST)

001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS

Arabidopsis Description

BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.