Factsheet for GSMUA_Achr6P19930_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P30570_001
GSMUA_Achr4P14550_001
GSMUA_Achr7P27650_001
GSMUA_Achr8P05200_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46330.1	GSMUA_Achr3P30570_001	AT2G21660.1	23395902
AT5G46330.1	GSMUA_Achr4P14550_001	AT2G21660.1	23395902
AT5G46330.1	GSMUA_Achr7P27650_001	AT2G21660.1	23395902
AT5G46330.1	GSMUA_Achr8P05200_001	AT2G21660.1	23395902

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002287_P001	Maize	plasma membrane	55.2	38.82
PGSC0003DMT400021384	Potato	plasma membrane	53.88	38.58
EES12871	Sorghum	plasma membrane	54.72	38.55
KRH42321	Soybean	plasma membrane	53.64	38.54
KRH58443	Soybean	plasma membrane	52.93	38.09
CDY35158	Canola	plasma membrane	39.31	38.08
Solyc02g070890.2.1	Tomato	plasma membrane	53.17	38.07
TraesCS2A01G461800.1	Wheat	plasma membrane	53.64	38.02
HORVU2Hr1G104030.4	Barley	mitochondrion, plasma membrane	50.06	37.65
Os04t0618700-01	Rice	plasma membrane	53.05	37.53
TraesCS2B01G483400.1	Wheat	plasma membrane	53.52	36.99
TraesCS2D01G462000.1	Wheat	plasma membrane	53.41	36.91
CDY03225	Canola	plasma membrane	45.16	35.63
VIT_10s0003g02930.t01	Wine grape	plastid	22.22	35.5
AT5G46330.1	Thale cress	plasma membrane	49.1	35.04
Solyc02g070910.1.1	Tomato	nucleus, plasma membrane	39.55	34.55
CDX87723	Canola	plasma membrane	38.95	34.06
Bra022032.1-P	Field mustard	plasma membrane	44.09	33.33
TraesCS2B01G483500.1	Wheat	extracellular, plasma membrane	18.64	32.43
TraesCS2D01G462100.1	Wheat	extracellular, plasma membrane	18.52	32.22
TraesCS2A01G461900.1	Wheat	extracellular, plasma membrane, vacuole	18.4	32.02
Bra017563.1-P	Field mustard	plasma membrane	45.04	30.53
CDY43966	Canola	cytosol	11.11	27.6
GSMUA_Achr8P03540_001	Banana	plasma membrane	29.27	25.55
GSMUA_Achr8P12120_001	Banana	plasma membrane, vacuole	24.13	24.54
GSMUA_Achr11P...	Banana	plasma membrane	25.45	24.04
GSMUA_Achr9P11410_001	Banana	plasma membrane	25.69	23.94
GSMUA_Achr8P15750_001	Banana	plasma membrane	27.48	22.89
GSMUA_Achr11P...	Banana	plasma membrane	21.62	21.94
GSMUA_Achr1P12010_001	Banana	plasma membrane	16.37	21.27
Solyc02g072390.1.1	Tomato	plastid	6.57	18.58

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0006898	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0010359	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016045	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0042742	GO:GO:0052544	EnsemblPlantsGene:GSMUA_Achr6G19930_001	EnsemblPlants:GSMUA_Achr6P19930_001	EnsemblPlants:GSMUA_Achr6T19930_001	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0T8J1	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855
PRINTS:PR00019	ScanProsite:PS00108	PFscan:PS50011	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002959F52
SEG:seg	:	:	:	:	:

Description

Putative LRR receptor-like serine/threonine-protein kinase FLS2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G19930_001]

Coordinates

chr6:+:14238888..14242709

Molecular Weight (calculated)

92720.2 Da

IEP (calculated)

5.798

GRAVY (calculated)

0.109

Length

837 amino acids

Sequence
(BLAST)

001: MALRQTLPLL LLLLCSLMAA EVVTSRRSIS DVQVEALLAF KASISDDPLG ALADWNTTIH HCNWSGLTCD PSTDAVISIS LPQMHLRGRL SPYLGNISTL
101: QFLDLTANYF FGLIPSEFGS LESLQWLDVS NNSFSGSIPD SICNCTSLLI LILGSNNLTD LSVNQLSGTI PPALGNFSHL EVVQLYENKL HKLKALRNEL
201: TGRIPSEFGS LTSVQWLSLH VNRLTGEIPP SLMNLTNLRY LSLSENSLSG PIPPNIGSLH KLEFLNFTFF SVGSNLLSGS VPEDLFNCSK LKTLDLALQH
301: NSLSGLIPPE IGNLSMLFKL QLHSNNFVGQ VPTEISKLFV GPIPDAMGNL QQLAYLYLND NMINGSIPQA MKNLRRLLTL DLSHNRLSGS IPGAVMASMS
401: NMQILNLSNN ELYGQLPSSI SELKSLVSLD VSHNRFSGQI PESLANLTSL QTLNLSFNQF EGFIPKGGIF SNFQKLTTKA LIIVITLCSL FVFLLVLFVG
501: LICFWKRDKN QFSHHATELS TELPLIPDLK RFTRSELEVA TESFSEENVI GRSNLSTVYK GRLEGDEHFV AVKRLNLEQF PVESDKCFFT ELKVLSRLKH
601: RNLVKVLGYA WESGKMKALT LEFMENGNLE SIIHSPQINF SRWTIYERLQ VCISVANGLA YLHSGYDFPI VHCDLKPSNI LLDRDWVAHV SDFGTARMLG
701: VHLQDGSNQT SSAAFQGTIG YMAPEFAYMR RASTKVDVFS FGVVMMELFT KRRPTGLIEE NGISLTLQQL VEKAIVTGLD SVLQIIDGDM NLASEIEEER
801: VTGVLELALS CTSFSAEDRP DMNEVLLSLL RLIGDKN

Best Arabidopsis Sequence Match ( AT5G46330.2 )
(BLAST)

0001: MKLLSKTFLI LTLTFFFFGI ALAKQSFEPE IEALKSFKNG ISNDPLGVLS DWTIIGSLRH CNWTGITCDS TGHVVSVSLL EKQLEGVLSP AIANLTYLQV
0101: LDLTSNSFTG KIPAEIGKLT ELNQLILYLN YFSGSIPSGI WELKNIFYLD LRNNLLSGDV PEEICKTSSL VLIGFDYNNL TGKIPECLGD LVHLQMFVAA
0201: GNHLTGSIPV SIGTLANLTD LDLSGNQLTG KIPRDFGNLL NLQSLVLTEN LLEGDIPAEI GNCSSLVQLE LYDNQLTGKI PAELGNLVQL QALRIYKNKL
0301: TSSIPSSLFR LTQLTHLGLS ENHLVGPISE EIGFLESLEV LTLHSNNFTG EFPQSITNLR NLTVLTVGFN NISGELPADL GLLTNLRNLS AHDNLLTGPI
0401: PSSISNCTGL KLLDLSHNQM TGEIPRGFGR MNLTFISIGR NHFTGEIPDD IFNCSNLETL SVADNNLTGT LKPLIGKLQK LRILQVSYNS LTGPIPREIG
0501: NLKDLNILYL HSNGFTGRIP REMSNLTLLQ GLRMYSNDLE GPIPEEMFDM KLLSVLDLSN NKFSGQIPAL FSKLESLTYL SLQGNKFNGS IPASLKSLSL
0601: LNTFDISDNL LTGTIPGELL ASLKNMQLYL NFSNNLLTGT IPKELGKLEM VQEIDLSNNL FSGSIPRSLQ ACKNVFTLDF SQNNLSGHIP DEVFQGMDMI
0701: ISLNLSRNSF SGEIPQSFGN MTHLVSLDLS SNNLTGEIPE SLANLSTLKH LKLASNNLKG HVPESGVFKN INASDLMGNT DLCGSKKPLK PCTIKQKSSH
0801: FSKRTRVILI ILGSAAALLL VLLLVLILTC CKKKEKKIEN SSESSLPDLD SALKLKRFEP KELEQATDSF NSANIIGSSS LSTVYKGQLE DGTVIAVKVL
0901: NLKEFSAESD KWFYTEAKTL SQLKHRNLVK ILGFAWESGK TKALVLPFME NGNLEDTIHG SAAPIGSLLE KIDLCVHIAS GIDYLHSGYG FPIVHCDLKP
1001: ANILLDSDRV AHVSDFGTAR ILGFREDGST TASTSAFEGT IGYLAPEFAY MRKVTTKADV FSFGIIMMEL MTKQRPTSLN DEDSQDMTLR QLVEKSIGNG
1101: RKGMVRVLDM ELGDSIVSLK QEEAIEDFLK LCLFCTSSRP EDRPDMNEIL THLMKLRGKA NSFREDRNED REV

Arabidopsis Description

FLS2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGU8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.