Factsheet for TraesCS2D01G462100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G293000.1
TraesCS4B01G020300.1
TraesCS4D01G018500.1
TraesCS5A01G015000.1
TraesCS5B01G013200.1
TraesCS5D01G020900.1
TraesCS6A01G216500.1
TraesCS6B01G246400.1
TraesCS6D01G199100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46330.1	TraesCS4A01G293000.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS4B01G020300.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS4D01G018500.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS5A01G015000.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS5B01G013200.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS5D01G020900.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS6A01G216500.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS6B01G246400.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS6D01G199100.1	AT2G21660.1	23395902

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G461900.1	Wheat	extracellular, plasma membrane, vacuole	95.01	95.01
TraesCS2B01G483500.1	Wheat	extracellular, plasma membrane	92.31	92.31
TraesCS2D01G462000.1	Wheat	plasma membrane	85.65	34.02
HORVU2Hr1G104030.4	Barley	mitochondrion, plasma membrane	74.43	32.17
EES12871	Sorghum	plasma membrane	66.11	26.77
Zm00001d002287_P001	Maize	plasma membrane	65.9	26.64
Solyc02g072390.1.1	Tomato	plastid	16.22	26.35
Os04t0618700-01	Rice	plasma membrane	64.24	26.12
VIT_10s0003g02930.t01	Wine grape	plastid	28.27	25.95
Solyc02g070910.1.1	Tomato	nucleus, plasma membrane	49.9	25.05
PGSC0003DMT400021384	Potato	plasma membrane	49.06	20.19
Solyc02g070890.2.1	Tomato	plasma membrane	49.06	20.19
KRH42321	Soybean	plasma membrane	48.23	19.91
Bra022032.1-P	Field mustard	plasma membrane	44.7	19.42
KRH58443	Soybean	plasma membrane	46.78	19.35
AT5G46330.1	Thale cress	plasma membrane	46.36	19.01
GSMUA_Achr6P19930_001	Banana	plasma membrane	32.22	18.52
TraesCS1D01G116000.1	Wheat	plasma membrane	35.76	17.84
CDY03225	Canola	plasma membrane	34.93	15.83
CDX87723	Canola	plasma membrane	28.48	14.32
Bra017563.1-P	Field mustard	plasma membrane	34.1	13.28
CDY35158	Canola	plasma membrane	23.49	13.08
TraesCS2D01G395000.1	Wheat	plasma membrane	31.81	13.05
CDY43966	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR43887	SMART:SM00365	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G462100	EnsemblPlants:TraesCS2D01G462100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:568192233..568193903

Molecular Weight (calculated)

50892.7 Da

IEP (calculated)

6.305

GRAVY (calculated)

0.175

Length

481 amino acids

Sequence
(BLAST)

001: MVARHTWLLP PVLAVCLAVA LLAADASAPL HLEALLAFKK AVTADPLGAL SGWTVGAGDA VRGGVPRHCN WTGVACDGAG RVTSIQLLQT QLQGALTPFL
101: GNISTLQLLD LTENAFTGGI PPQLGRLGEL QQLILAENGF AGGIPQELGD LGSLELLDLG NNSLSGGIPS SLCNCSAMWA LGLDTNNLTG QIPSCIGDLD
201: KLQIFEAFMT NLDGELPPSF AKLTQMKSLD LSANKLSGSI PPEIGNFSHL WILQLVENRF SGPIPSELGR CKNLTRLNIY SNRFTGAIPR ELGELVNLEE
301: LRLYDNALSS EIPSSLGRCT KLVSLGLSKN RLTGSIPPEL GELRSLQTLT LHDNRLTGTV PTSLTNLVNL TYLSLSNNSL SGRLPENIGA LRNLRKLIIH
401: SNSLSGPIPV SIANCTLLSN ASMSSNELTG HLPAGLGQLQ GLVFFSVGNN SLNGSIPKDL LHCVNLRTLV LASNNFTGGL W

Best Arabidopsis Sequence Match ( AT5G46330.1 )
(BLAST)

0001: MKLLSKTFLI LTLTFFFFGI ALAKQSFEPE IEALKSFKNG ISNDPLGVLS DWTIIGSLRH CNWTGITCDS TGHVVSVSLL EKQLEGVLSP AIANLTYLQV
0101: LDLTSNSFTG KIPAEIGKLT ELNQLILYLN YFSGSIPSGI WELKNIFYLD LRNNLLSGDV PEEICKTSSL VLIGFDYNNL TGKIPECLGD LVHLQMFVAA
0201: GNHLTGSIPV SIGTLANLTD LDLSGNQLTG KIPRDFGNLL NLQSLVLTEN LLEGDIPAEI GNCSSLVQLE LYDNQLTGKI PAELGNLVQL QALRIYKNKL
0301: TSSIPSSLFR LTQLTHLGLS ENHLVGPISE EIGFLESLEV LTLHSNNFTG EFPQSITNLR NLTVLTVGFN NISGELPADL GLLTNLRNLS AHDNLLTGPI
0401: PSSISNCTGL KLLDLSHNQM TGEIPRGFGR MNLTFISIGR NHFTGEIPDD IFNCSNLETL SVADNNLTGT LKPLIGKLQK LRILQVSYNS LTGPIPREIG
0501: NLKDLNILYL HSNGFTGRIP REMSNLTLLQ GLRMYSNDLE GPIPEEMFDM KLLSVLDLSN NKFSGQIPAL FSKLESLTYL SLQGNKFNGS IPASLKSLSL
0601: LNTFDISDNL LTGTIPGELL ASLKNMQLYL NFSNNLLTGT IPKELGKLEM VQEIDLSNNL FSGSIPRSLQ ACKNVFTLDF SQNNLSGHIP DEVFQGMDMI
0701: ISLNLSRNSF SGEIPQSFGN MTHLVSLDLS SNNLTGEIPE SLANLSTLKH LKLASNNLKG HVPESGVFKN INASDLMGNT DLCGSKKPLK PCTIKQKSSH
0801: FSKRTRVILI ILGSAAALLL VLLLVLILTC CKKKEKKIEN SSESSLPDLD SALKLKRFEP KELEQATDSF NSANIIGSSS LSTVYKGQLE DGTVIAVKVL
0901: NLKEFSAESD KWFYTEAKTL SQLKHRNLVK ILGFAWESGK TKALVLPFME NGNLEDTIHG SAAPIGSLLE KIDLCVHIAS GIDYLHSGYG FPIVHCDLKP
1001: ANILLDSDRV AHVSDFGTAR ILGFREDGST TASTSAFEGT IGYLAPEFAY MRKVTTKADV FSFGIIMMEL MTKQRPTSLN DEDSQDMTLR QLVEKSIGNG
1101: RKGMVRVLDM ELGDSIVSLK QEEAIEDFLK LCLFCTSSRP EDRPDMNEIL THLMKLRGKA NSFREDRNED REV

Arabidopsis Description

FLS2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGU8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.