Factsheet for TraesCS2A01G461900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G293000.1
TraesCS4B01G020300.1
TraesCS4D01G018500.1
TraesCS5A01G015000.1
TraesCS5B01G013200.1
TraesCS5D01G020900.1
TraesCS6A01G216500.1
TraesCS6B01G246400.1
TraesCS6D01G199100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46330.1	TraesCS4A01G293000.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS4B01G020300.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS4D01G018500.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS5A01G015000.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS5B01G013200.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS5D01G020900.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS6A01G216500.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS6B01G246400.1	AT2G21660.1	23395902
AT5G46330.1	TraesCS6D01G199100.1	AT2G21660.1	23395902

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G462100.1	Wheat	extracellular, plasma membrane	95.01	95.01
TraesCS2B01G483500.1	Wheat	extracellular, plasma membrane	91.89	91.89
TraesCS2A01G461800.1	Wheat	plasma membrane	87.32	35.56
HORVU2Hr1G104030.4	Barley	mitochondrion, plasma membrane	74.64	32.26
EES12871	Sorghum	plasma membrane	66.32	26.85
Zm00001d002287_P001	Maize	plasma membrane	66.32	26.81
Solyc02g072390.1.1	Tomato	plastid	16.42	26.69
VIT_10s0003g02930.t01	Wine grape	plastid	28.27	25.95
Os04t0618700-01	Rice	plasma membrane	63.62	25.87
Solyc02g070910.1.1	Tomato	nucleus, plasma membrane	49.9	25.05
Solyc02g070890.2.1	Tomato	plasma membrane	49.48	20.36
PGSC0003DMT400021384	Potato	plasma membrane	49.06	20.19
KRH42321	Soybean	plasma membrane	48.44	20.0
TraesCS2A01G090100.1	Wheat	plasma membrane	24.74	19.77
Bra022032.1-P	Field mustard	plasma membrane	45.11	19.6
KRH58443	Soybean	plasma membrane	46.99	19.43
AT5G46330.1	Thale cress	plasma membrane	46.57	19.1
GSMUA_Achr6P19930_001	Banana	plasma membrane	32.02	18.4
TraesCS1A01G114700.1	Wheat	plasma membrane	36.38	18.15
CDY03225	Canola	plasma membrane	35.76	16.21
CDX87723	Canola	plasma membrane	29.11	14.63
TraesCS2A01G230100.1	Wheat	plastid	39.29	14.54
Bra017563.1-P	Field mustard	plasma membrane	34.93	13.6
CDY35158	Canola	plasma membrane	24.12	13.43
TraesCS2A01G397200.1	Wheat	plasma membrane	32.43	13.32
CDY43966	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR45297	SMART:SM00369	SUPFAM:SSF52047
SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G461900	EnsemblPlants:TraesCS2A01G461900.1	SEG:seg

Description

No Description!

Coordinates

chr2A:-:707736223..707737668

Molecular Weight (calculated)

51125.9 Da

IEP (calculated)

6.702

GRAVY (calculated)

0.142

Length

481 amino acids

Sequence
(BLAST)

001: MVARRTWLLP PVLAVWLAVA LLAADAAAPL HLEALLAFKK GVTADPLGAL SDWTAGAGDA VRGGVPRHCN WTGVACDGAG RVTSIQLLQT QLQGTLTPFL
101: GNISTLQLLD LTENGFTGAI PPQLGRLGEL QQLILTENGF AGGIPPELGD LGSLQLLDLG NNSLSGGIPS RLCNCSAMWA LGLNTNNLNG QIPSCIGDLH
201: KLQIFEAFMN NLDGELPPSF AKLTRMKSLD LSANNLSGSI PPEIGNFSHL WILQLVENRF SGPIPSELGR CKNLTRLNIY SNRFTGAIPR ELGELVNLEE
301: LRLYHNVLSS EIPSSLGRCT KLVSLGLSTN QLTGSIPPEL GELRSLQTLT LHDNRLTGTV PTSLTNLVNL TYLSLSNNSL SGRLPENIGA LRNLRKLIIH
401: SNSLSGPIPV SIANCTLLSN ASMSSNELTG HLPAGLGQLQ GLVFFSVGNN SLNGSIPKDL LDCVNLRTLV LASNNFTGGL W

Best Arabidopsis Sequence Match ( AT1G35710.1 )
(BLAST)

0001: MGFAEKNLYD FRFLLFISII LSCSISASAT IAEANALLKW KSTFTNSSKL SSWVHDANTN TSFSCTSWYG VSCNSRGSIE ELNLTNTGIE GTFQDFPFIS
0101: LSNLAYVDLS MNLLSGTIPP QFGNLSKLIY FDLSTNHLTG EISPSLGNLK NLTVLYLHQN YLTSVIPSEL GNMESMTDLA LSQNKLTGSI PSSLGNLKNL
0201: MVLYLYENYL TGVIPPELGN MESMTDLALS QNKLTGSIPS TLGNLKNLMV LYLYENYLTG VIPPEIGNME SMTNLALSQN KLTGSIPSSL GNLKNLTLLS
0301: LFQNYLTGGI PPKLGNIESM IDLELSNNKL TGSIPSSLGN LKNLTILYLY ENYLTGVIPP ELGNMESMID LQLNNNKLTG SIPSSFGNLK NLTYLYLYLN
0401: YLTGVIPQEL GNMESMINLD LSQNKLTGSV PDSFGNFTKL ESLYLRVNHL SGAIPPGVAN SSHLTTLILD TNNFTGFFPE TVCKGRKLQN ISLDYNHLEG
0501: PIPKSLRDCK SLIRARFLGN KFTGDIFEAF GIYPDLNFID FSHNKFHGEI SSNWEKSPKL GALIMSNNNI TGAIPTEIWN MTQLVELDLS TNNLFGELPE
0601: AIGNLTNLSR LRLNGNQLSG RVPAGLSFLT NLESLDLSSN NFSSEIPQTF DSFLKLHDMN LSRNKFDGSI PRLSKLTQLT QLDLSHNQLD GEIPSQLSSL
0701: QSLDKLDLSH NNLSGLIPTT FEGMIALTNV DISNNKLEGP LPDTPTFRKA TADALEENIG LCSNIPKQRL KPCRELKKPK KNGNLVVWIL VPILGVLVIL
0801: SICANTFTYC IRKRKLQNGR NTDPETGENM SIFSVDGKFK YQDIIESTNE FDPTHLIGTG GYSKVYRANL QDTIIAVKRL HDTIDEEISK PVVKQEFLNE
0901: VKALTEIRHR NVVKLFGFCS HRRHTFLIYE YMEKGSLNKL LANDEEAKRL TWTKRINVVK GVAHALSYMH HDRITPIVHR DISSGNILLD NDYTAKISDF
1001: GTAKLLKTDS SNWSAVAGTY GYVAPEFAYT MKVTEKCDVY SFGVLILELI IGKHPGDLVS SLSSSPGEAL SLRSISDERV LEPRGQNREK LLKMVEMALL
1101: CLQANPESRP TMLSISTTFS

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g35710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP24]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.