CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES16438
KXG37870

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46330.1	EES16438	AT2G21660.1	23395902
AT5G46330.1	KXG37870	AT2G21660.1	23395902

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002287_P001	Maize	plasma membrane	87.79	87.65
TraesCS2A01G461800.1	Wheat	plasma membrane	72.98	73.41
HORVU2Hr1G104030.4	Barley	mitochondrion, plasma membrane	68.18	72.78
TraesCS2D01G462000.1	Wheat	plasma membrane	72.9	71.51
TraesCS2B01G483400.1	Wheat	plasma membrane	72.39	71.02
Os04t0618700-01	Rice	plasma membrane	70.37	70.67
TraesCS2B01G483500.1	Wheat	extracellular, plasma membrane	27.19	67.15
TraesCS2A01G461900.1	Wheat	extracellular, plasma membrane, vacuole	26.85	66.32
TraesCS2D01G462100.1	Wheat	extracellular, plasma membrane	26.77	66.11
GSMUA_Achr6P19930_001	Banana	plasma membrane	38.55	54.72
VIT_10s0003g02930.t01	Wine grape	plastid	21.8	49.43
PGSC0003DMT400021384	Potato	plasma membrane	48.48	49.27
Solyc02g070890.2.1	Tomato	plasma membrane	47.9	48.67
KRH42321	Soybean	plasma membrane	47.22	48.15
KRH58443	Soybean	plasma membrane	46.72	47.72
Solyc02g070910.1.1	Tomato	nucleus, plasma membrane	37.71	46.76
CDY03225	Canola	plasma membrane	41.67	46.65
CDY35158	Canola	plasma membrane	33.25	45.72
AT5G46330.1	Thale cress	plasma membrane	45.03	45.61
Bra022032.1-P	Field mustard	plasma membrane	41.16	44.17
CDX87723	Canola	plasma membrane	35.35	43.89
CDY43966	Canola	cytosol	12.04	42.43
Bra017563.1-P	Field mustard	plasma membrane	41.33	39.76
OQU80566	Sorghum	extracellular	12.29	34.93
EES17792	Sorghum	plasma membrane	27.1	32.92
OQU82190	Sorghum	plasma membrane	31.31	32.43
Solyc02g072390.1.1	Tomato	plastid	7.83	31.42
OQU80565	Sorghum	extracellular	8.16	29.57

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.12	MapMan:26.8.1.1.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:8066793
UniProt:C5YG40	EnsemblPlants:EES12871	ProteinID:EES12871	ProteinID:EES12871.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0006810	GO:GO:0006898	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0010359	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016045	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0042742
GO:GO:0052544	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00108	PFscan:PS50011	InterPro:Prot_kinase_dom	SMART:SM00220
SMART:SM00365	SMART:SM00369	EnsemblPlantsGene:SORBI_3006G217900	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112
unigene:Sbi.1953	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A8766C	RefSeq:XP_002448543.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:56528487..56532164

Molecular Weight (calculated)

125842.0 Da

IEP (calculated)

5.169

GRAVY (calculated)

0.158

Length

1188 amino acids

Sequence
(BLAST)

0001: MASCKNTCSC FPLSNVAAVL AIAVLVLAAP AAAAVPDASE SVHLEALLAF KEAVTADPNG TLSSWTVGTG NGRGGGGGFP PHCNWTGVAC DGAGHVTSIE
0101: LAETGLRGTL TPFLGNITTL RMLDLTSNRF GGAIPPQLGR LDELKGLGLG DNSFTGAIPP ELGELGSLQV LDLSNNTLGG GIPSRLCNCS AMTQFSVFNN
0201: DLTGAVPDCI GDLVNLNELI LSLNNLDGEL PPSFAKLTQL ETLDLSSNQL SGPIPSWIGN FSSLNIVHMF ENQFSGAIPP ELGRCKNLTT LNMYSNRLTG
0301: AIPSELGELT NLKVLLLYSN ALSSEIPRSL GRCTSLLSLV LSKNQFTGTI PTELGKLRSL RKLMLHANKL TGTVPASLMD LVNLTYLSFS DNSLSGPLPA
0401: NIGSLQNLQV LNIDTNSLSG PIPASITNCT SLYNASMAFN EFSGPLPAGL GQLQNLNFLS LGDNKLSGDI PEDLFDCSNL RTLDLAWNSF TGSLSPRVGR
0501: LSELILLQLQ FNALSGEIPE EIGNLTKLIT LPLEGNRFAG RVPKSISNMS SLQGLRLQHN SLEGTLPDEI FGLRQLTILS VASNRFVGPI PDAVSNLRSL
0601: SFLDMSNNAL NGTVPAAVGN LGQLLMLDLS HNRLAGAIPG AVIAKLSTLQ MYLNLSNNMF TGPIPAEIGG LAMVQSIDLS NNRLSGGFPA TLARCKNLYS
0701: LDLSANNLTV ALPADLFPQL DVLTSLNISG NELDGDIPSN IGALKNIQTL DASRNAFTGA IPAALANLTS LRSLNLSSNQ LEGPVPDSGV FSNLSMSSLQ
0801: GNAGLCGGKL LAPCHHAGKK GFSRTGLVVL VVLLVLAVLL LLLLVTILFL GYRRYKKKGG STRATGFSED FVVPELRKFT YSELEAATGS FDEGNVIGSS
0901: NLSTVYKGVL VEPDGKVVAV KRLNLAQFPA KSDKCFLTEL ATLSRLRHKN LVRVVGYACE PGKIKALVLD FMDNGDLDGE IHGTGRDAQR WTVPERLRAC
1001: VSVAHGVVYL HTGYDFPVVH CDVKPSNVLL DSDWEARVSD FGTARMLGVH LTDAAAQSAT SSAFRGTVGY MAPEFAYMRT VSPKADVFSF GVLMMELFTK
1101: RRPTGTIEEN GVPLTLQQYV DNAISRGLDG VLDVLDPDMK VVTEGELSTA VDVLSLALSC AAFEPADRPD MDSVLSTLLK MSKVCGGD

Best Arabidopsis Sequence Match ( AT5G46330.2 )
(BLAST)

0001: MKLLSKTFLI LTLTFFFFGI ALAKQSFEPE IEALKSFKNG ISNDPLGVLS DWTIIGSLRH CNWTGITCDS TGHVVSVSLL EKQLEGVLSP AIANLTYLQV
0101: LDLTSNSFTG KIPAEIGKLT ELNQLILYLN YFSGSIPSGI WELKNIFYLD LRNNLLSGDV PEEICKTSSL VLIGFDYNNL TGKIPECLGD LVHLQMFVAA
0201: GNHLTGSIPV SIGTLANLTD LDLSGNQLTG KIPRDFGNLL NLQSLVLTEN LLEGDIPAEI GNCSSLVQLE LYDNQLTGKI PAELGNLVQL QALRIYKNKL
0301: TSSIPSSLFR LTQLTHLGLS ENHLVGPISE EIGFLESLEV LTLHSNNFTG EFPQSITNLR NLTVLTVGFN NISGELPADL GLLTNLRNLS AHDNLLTGPI
0401: PSSISNCTGL KLLDLSHNQM TGEIPRGFGR MNLTFISIGR NHFTGEIPDD IFNCSNLETL SVADNNLTGT LKPLIGKLQK LRILQVSYNS LTGPIPREIG
0501: NLKDLNILYL HSNGFTGRIP REMSNLTLLQ GLRMYSNDLE GPIPEEMFDM KLLSVLDLSN NKFSGQIPAL FSKLESLTYL SLQGNKFNGS IPASLKSLSL
0601: LNTFDISDNL LTGTIPGELL ASLKNMQLYL NFSNNLLTGT IPKELGKLEM VQEIDLSNNL FSGSIPRSLQ ACKNVFTLDF SQNNLSGHIP DEVFQGMDMI
0701: ISLNLSRNSF SGEIPQSFGN MTHLVSLDLS SNNLTGEIPE SLANLSTLKH LKLASNNLKG HVPESGVFKN INASDLMGNT DLCGSKKPLK PCTIKQKSSH
0801: FSKRTRVILI ILGSAAALLL VLLLVLILTC CKKKEKKIEN SSESSLPDLD SALKLKRFEP KELEQATDSF NSANIIGSSS LSTVYKGQLE DGTVIAVKVL
0901: NLKEFSAESD KWFYTEAKTL SQLKHRNLVK ILGFAWESGK TKALVLPFME NGNLEDTIHG SAAPIGSLLE KIDLCVHIAS GIDYLHSGYG FPIVHCDLKP
1001: ANILLDSDRV AHVSDFGTAR ILGFREDGST TASTSAFEGT IGYLAPEFAY MRKVTTKADV FSFGIIMMEL MTKQRPTSLN DEDSQDMTLR QLVEKSIGNG
1101: RKGMVRVLDM ELGDSIVSLK QEEAIEDFLK LCLFCTSSRP EDRPDMNEIL THLMKLRGKA NSFREDRNED REV

Arabidopsis Description

FLS2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGU8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.