Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037666_P001 Maize plasma membrane 91.82 91.91
TraesCS1D01G116000.1 Wheat plasma membrane 75.15 76.24
TraesCS1B01G134600.1 Wheat plasma membrane 74.85 75.7
TraesCS1A01G114700.1 Wheat plasma membrane 74.54 75.62
HORVU1Hr1G025250.16 Barley plasma membrane 73.82 73.15
Os05t0170300-00 Rice extracellular, plasma membrane, plastid 76.48 71.92
GSMUA_Achr1P12010_001 Banana plasma membrane 38.04 57.76
KRH57093 Soybean plasma membrane 52.76 53.64
VIT_17s0000g08760.t01 Wine grape plasma membrane 52.66 53.37
KRH63566 Soybean plasma membrane 52.45 53.22
KRH03261 Soybean extracellular 52.15 52.52
PGSC0003DMT400046778 Potato plasma membrane 51.33 51.54
Solyc03g112680.1.1 Tomato plasma membrane 51.12 51.33
OQU80566 Sorghum extracellular 14.42 33.73
OQU80565 Sorghum extracellular 9.71 28.96
EES12871 Sorghum plasma membrane 32.92 27.1
OQU82190 Sorghum plasma membrane 30.98 26.42
Protein Annotations
MapMan:11.10.1.4.2Gene3D:3.80.10.10EntrezGene:8080943UniProt:C5Z137EnsemblPlants:EES17792ProteinID:EES17792
ProteinID:EES17792.1GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtypPFAM:PF00560PFAM:PF08263PFAM:PF13855PANTHER:PTHR27000PANTHER:PTHR27000:SF187
SMART:SM00369EnsemblPlantsGene:SORBI_3009G061400SUPFAM:SSF52047SUPFAM:SSF52058SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001A888C1RefSeq:XP_002439362.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr9:+:6406992..6410841
Molecular Weight (calculated)
102558.0 Da
IEP (calculated)
4.873
GRAVY (calculated)
0.163
Length
978 amino acids
Sequence
(BLAST)
001: MAIKQSNSFS PRVHAGLSLL FCILLAPVSL ATPATAPAAL LEVKSGLTDP EGVLSGWSLE ADVCSWHGIT CLPGEVGIVT GLNLSGYGLS GVIPPAISGL
101: VSVESIDLSS NSLTGPIPPE LGVLENLRTL LLFSNSLTGT IPPELGLLKN LKVLRIGDNR LHGEIPPQLG DCSELETLGL AYCQLNGTIP AELGNLKQLQ
201: KLALDNNTLT GGIPEQLAGC VSLRFLSVSD NMLQGNIPSF LGSFSDLQSL NLANNQFSGE IPVEIGNLSS LTYLNLLGNS LTGAIPAELN RLGQLQVLDL
301: SMNNISGKVS ISPAQLKNLK YLVLSGNLLD GAIPEDLCAG DSSSLLENLF LAGNNLEGGI EALLNCDALQ SIDVSNNSFT GVIPPGIDRL PGLVNLALHN
401: NSFTGGLPRQ IGNLSNLEIL SLFHNGLTGG IPSEIGRLQK LKLLFLYENQ MSGTIPDELT NCTSLEEVDF FGNHFHGPIP ERIGNLRNLA VLQLRQNDLS
501: GPIPASLGEC RSLQALALAD NRLTGVLPET FGQLTELSVV TLYNNSLEGP LPESLFQLKN LTVINFSHNR FAGSLVPLLG STSLAVLALT SNSFSGVIPA
601: VVARSRNMVR LQLGGNRLTG AIPAELGNLT RLSMLDLSLN NLSGDIPAEL SSCVELTHLK LDGNSLTGTV PAWLGSLRSL GELDLSWNVF TGGIPPELGN
701: CSGLLKLSLS DNHLTGSIPP EIGRLTSLNV LNLNKNSLTG AIPPSLQQCN KLYELRLSEN SLEGPIPPEL GQLSELQVIL DLSRNRLSGE IPASLGSLVK
801: LERLNLSSNR LDGQIPSSLL QLTSLHRLNL SDNLLSGAVP AGLSSFPAAS FVGNELCGAP LPPCGPRSPA RRLSGTEVVV IVAGIALVSA VVCVALLYTM
901: LRVWSNWRAV SVSNSDGEES VHGGGGHGGG GGKWGDGKYW KVGSPVSWSA EQKHSSGSET ASVLHGKSTE AAAGAGKS
Best Arabidopsis Sequence Match ( AT4G20140.1 )
(BLAST)
0001: MQPLVLLLLF ILCFSGLGQP GIINNDLQTL LEVKKSLVTN PQEDDPLRQW NSDNINYCSW TGVTCDNTGL FRVIALNLTG LGLTGSISPW FGRFDNLIHL
0101: DLSSNNLVGP IPTALSNLTS LESLFLFSNQ LTGEIPSQLG SLVNIRSLRI GDNELVGDIP ETLGNLVNLQ MLALASCRLT GPIPSQLGRL VRVQSLILQD
0201: NYLEGPIPAE LGNCSDLTVF TAAENMLNGT IPAELGRLEN LEILNLANNS LTGEIPSQLG EMSQLQYLSL MANQLQGLIP KSLADLGNLQ TLDLSANNLT
0301: GEIPEEFWNM SQLLDLVLAN NHLSGSLPKS ICSNNTNLEQ LVLSGTQLSG EIPVELSKCQ SLKQLDLSNN SLAGSIPEAL FELVELTDLY LHNNTLEGTL
0401: SPSISNLTNL QWLVLYHNNL EGKLPKEISA LRKLEVLFLY ENRFSGEIPQ EIGNCTSLKM IDMFGNHFEG EIPPSIGRLK ELNLLHLRQN ELVGGLPASL
0501: GNCHQLNILD LADNQLSGSI PSSFGFLKGL EQLMLYNNSL QGNLPDSLIS LRNLTRINLS HNRLNGTIHP LCGSSSYLSF DVTNNGFEDE IPLELGNSQN
0601: LDRLRLGKNQ LTGKIPWTLG KIRELSLLDM SSNALTGTIP LQLVLCKKLT HIDLNNNFLS GPIPPWLGKL SQLGELKLSS NQFVESLPTE LFNCTKLLVL
0701: SLDGNSLNGS IPQEIGNLGA LNVLNLDKNQ FSGSLPQAMG KLSKLYELRL SRNSLTGEIP VEIGQLQDLQ SALDLSYNNF TGDIPSTIGT LSKLETLDLS
0801: HNQLTGEVPG SVGDMKSLGY LNVSFNNLGG KLKKQFSRWP ADSFLGNTGL CGSPLSRCNR VRSNNKQQGL SARSVVIISA ISALTAIGLM ILVIALFFKQ
0901: RHDFFKKVGH GSTAYTSSSS SSQATHKPLF RNGASKSDIR WEDIMEATHN LSEEFMIGSG GSGKVYKAEL ENGETVAVKK ILWKDDLMSN KSFSREVKTL
1001: GRIRHRHLVK LMGYCSSKSE GLNLLIYEYM KNGSIWDWLH EDKPVLEKKK KLLDWEARLR IAVGLAQGVE YLHHDCVPPI VHRDIKSSNV LLDSNMEAHL
1101: GDFGLAKVLT ENCDTNTDSN TWFACSYGYI APEYAYSLKA TEKSDVYSMG IVLMEIVTGK MPTDSVFGAE MDMVRWVETH LEVAGSARDK LIDPKLKPLL
1201: PFEEDAACQV LEIALQCTKT SPQERPSSRQ ACDSLLHVYN NRTAGYKKL
Arabidopsis Description
GSO1LRR receptor-like serine/threonine-protein kinase GSO1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGQ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.