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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002599_P002 Maize mitochondrion, plasma membrane 93.11 94.1
Zm00001d026063_P001 Maize plasma membrane 94.59 92.81
Os04t0576900-01 Rice plasma membrane 48.47 89.39
TraesCS2D01G395000.1 Wheat plasma membrane 84.05 82.25
TraesCS2B01G415500.1 Wheat plasma membrane 83.78 82.21
TraesCS2A01G397200.1 Wheat plasma membrane 83.7 81.98
HORVU2Hr1G094360.1 Barley plastid 83.7 77.11
GSMUA_Achr11P... Banana plasma membrane 51.79 72.0
GSMUA_Achr11P... Banana plasma membrane 55.1 71.33
GSMUA_Achr8P12120_001 Banana plasma membrane, vacuole 48.74 67.92
VIT_04s0023g03070.t01 Wine grape plasma membrane 59.98 60.88
KRH28774 Soybean plasma membrane 58.06 58.89
VIT_18s0001g13590.t01 Wine grape plasma membrane 55.27 58.01
PGSC0003DMT400009520 Potato cytosol 55.36 57.67
CDX75559 Canola plasma membrane 54.05 57.46
Bra011668.1-P Field mustard plasma membrane 56.32 57.42
KRH61075 Soybean plasma membrane 56.5 57.35
AT4G36180.1 Thale cress plasma membrane 56.76 57.31
PGSC0003DMT400009133 Potato plasma membrane 56.06 57.05
Solyc02g084370.1.1 Tomato plasma membrane 56.06 57.05
CDX69210 Canola plasma membrane 53.27 56.78
KRH51753 Soybean plasma membrane 56.06 56.75
Solyc04g081080.1.1 Tomato plasma membrane 55.97 56.51
KRH08102 Soybean plasma membrane 54.58 56.45
KRH69809 Soybean plasma membrane 55.45 56.28
PGSC0003DMT400058132 Potato plasma membrane 53.09 54.28
Solyc03g033610.1.1 Tomato plasma membrane, plastid 53.27 54.17
CDY47508 Canola plasma membrane 51.35 54.04
CDX73184 Canola plasma membrane 51.09 53.81
Bra015829.1-P Field mustard plasma membrane 52.75 53.16
AT1G75640.1 Thale cress plasma membrane 51.96 52.28
OQU80566 Sorghum extracellular 12.12 33.25
OQU80565 Sorghum extracellular 9.42 32.93
EES12871 Sorghum plasma membrane 32.43 31.31
EES17792 Sorghum plasma membrane 26.42 30.98
Os04t0576800-02 Rice plasma membrane 2.18 7.06
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.7Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1Z5REL1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_4InterPro:Leu-rich_rpt_typical-subtypEnsemblPlants:OQU82190ProteinID:OQU82190ProteinID:OQU82190.1PFAM:PF00069
PFAM:PF00560PFAM:PF08263PFAM:PF12799PFAM:PF13855PRINTS:PR00019ScanProsite:PS00108
PFscan:PS50011PFscan:PS51450PANTHER:PTHR27000PANTHER:PTHR27000:SF322InterPro:Prot_kinase_domSMART:SM00220
SMART:SM00365SMART:SM00369EnsemblPlantsGene:SORBI_3006G187000SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B8BB02FSEG:seg:
Description
hypothetical protein
Coordinates
chr6:+:54187565..54191059
Molecular Weight (calculated)
121018.0 Da
IEP (calculated)
5.384
GRAVY (calculated)
0.043
Length
1147 amino acids
Sequence
(BLAST)
0001: MPPSSRSLFL LLMLALTPLA SLAATAPAPP VARTAGVQAE IDALLAFRRG LRDPYGAMSG WDAASPSAPC SWRGVACAQG GAAGRVVELQ LPRLRLSGPI
0101: SPALGSLPYL ERLSLRSNDL SGAIPASLAR VTSLRAVFLQ SNSLSGPIPQ SFLANLTNLD TFDVSGNLLS GPVPVSFPPS LKYLDLSSNA FSGTIPANIS
0201: ASTANLQFLN LSFNRLRGTV PASLGNLQNL HYLWLDGNLL EGTIPAALAN CSALLHLSLQ GNSLRGILPS AVAAIPTLQI LSVSRNQLTG TIPAAAFGAQ
0301: GNSSLRIVQL GGNEFSQVDV PGALAADLQV VDLGGNKLAG PFPTWLAGAG GLTLLDLSGN AFTGELPPAV GQLTALLELR LGGNAFSGAV PAEIGRCGAL
0401: QVLDLEDNHF TGDVPSSLGG LPRLREAYLG GNTFSGQIPA SFGNLSWLEA LSIQRNRLTG RLSGELFRLG NLTFLDLSEN NLTGEIPPAI GNLLALQSLN
0501: LSGNAFSGHI PTTIGNLQNL RVLDLSGQKN LSGNVPAELF GLPQLQYVSF ADNSFSGDVP EGFSSLWSLR NLNLSGNSFT GSIPATYGYL PSLQVLSASH
0601: NHISGELPAE LANCSNLTVL ELSGNQLTGS IPSDLSRLDE LEELDLSYNQ LSGKIPPEIS NCSSLALLKL DDNHIGGDIP ASLANLSKLQ TLDLSSNNLT
0701: GSIPASLAQI PGLLSFNVSH NELSGEIPAM LGSRFGIASA YSSNSDLCGP PLESECGEYR RRRRRQRVQR LALLIGVVLL RWRRRFIESR DGVKKRRRSP
0801: GRGSGSSGTS TENGVSQPKL IMFNSRITYA DTVEATRQFD EENVLSRGRH GLVFKACYSD GTVLAIQRLP STSSDGAVVI DEGSFRKEAE SLGKVKHRNL
0901: TVLRGYYAGP PPDVRLLVYD YMPNGNLATL LQEASHQDGH ILNWPMRHLI ALGVSRGLAF LHQSGVVHGD VKPQNILFDA DFEPHLSDFG LEPMVVTAGA
1001: AAAAAAASTS AATPVGSLGY VAPDAAAAGQ ATREGDVYSF GIVLLELLTG RRPGMFAGEE EDIVKWVKRQ LQRGAVAELL EPGLLELDPE SSEWEEFLLG
1101: IKVGLLCTAS DPLDRPAMGD VVFMLEGCRV GPDIPSSADP TSQPSPA
Best Arabidopsis Sequence Match ( AT4G36180.1 )
(BLAST)
0001: MAMDISLFFI FLVIYAPLVS YADESQAEID ALTAFKLNLH DPLGALTSWD PSTPAAPCDW RGVGCTNHRV TEIRLPRLQL SGRISDRISG LRMLRKLSLR
0101: SNSFNGTIPT SLAYCTRLLS VFLQYNSLSG KLPPAMRNLT SLEVFNVAGN RLSGEIPVGL PSSLQFLDIS SNTFSGQIPS GLANLTQLQL LNLSYNQLTG
0201: EIPASLGNLQ SLQYLWLDFN LLQGTLPSAI SNCSSLVHLS ASENEIGGVI PAAYGALPKL EVLSLSNNNF SGTVPFSLFC NTSLTIVQLG FNAFSDIVRP
0301: ETTANCRTGL QVLDLQENRI SGRFPLWLTN ILSLKNLDVS GNLFSGEIPP DIGNLKRLEE LKLANNSLTG EIPVEIKQCG SLDVLDFEGN SLKGQIPEFL
0401: GYMKALKVLS LGRNSFSGYV PSSMVNLQQL ERLNLGENNL NGSFPVELMA LTSLSELDLS GNRFSGAVPV SISNLSNLSF LNLSGNGFSG EIPASVGNLF
0501: KLTALDLSKQ NMSGEVPVEL SGLPNVQVIA LQGNNFSGVV PEGFSSLVSL RYVNLSSNSF SGEIPQTFGF LRLLVSLSLS DNHISGSIPP EIGNCSALEV
0601: LELRSNRLMG HIPADLSRLP RLKVLDLGQN NLSGEIPPEI SQSSSLNSLS LDHNHLSGVI PGSFSGLSNL TKMDLSVNNL TGEIPASLAL ISSNLVYFNV
0701: SSNNLKGEIP ASLGSRINNT SEFSGNTELC GKPLNRRCES STAEGKKKKR KMILMIVMAA IGAFLLSLFC CFYVYTLLKW RKKLKQQSTT GEKKRSPGRT
0801: SAGSRVRSST SRSSTENGEP KLVMFNNKIT LAETIEATRQ FDEENVLSRT RYGLLFKANY NDGMVLSIRR LPNGSLLNEN LFKKEAEVLG KVKHRNITVL
0901: RGYYAGPPDL RLLVYDYMPN GNLSTLLQEA SHQDGHVLNW PMRHLIALGI ARGLGFLHQS NMVHGDIKPQ NVLFDADFEA HISDFGLDRL TIRSPSRSAV
1001: TANTIGTLGY VSPEATLSGE ITRESDIYSF GIVLLEILTG KRPVMFTQDE DIVKWVKKQL QRGQVTELLE PGLLELDPES SEWEEFLLGI KVGLLCTATD
1101: PLDRPTMSDV VFMLEGCRVG PDVPSSADPT SQPSPA
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.