Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 8
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009520 | Potato | cytosol | 93.93 | 96.91 |
| VIT_18s0001g13590.t01 | Wine grape | plasma membrane | 67.96 | 70.63 |
| KRH51753 | Soybean | plasma membrane | 65.05 | 65.23 |
| KRH61075 | Soybean | plasma membrane | 64.61 | 64.96 |
| Solyc02g084370.1.1 | Tomato | plasma membrane | 62.68 | 63.18 |
| AT1G75640.1 | Thale cress | plasma membrane | 62.76 | 62.54 |
| CDY47508 | Canola | plasma membrane | 58.98 | 61.47 |
| Bra015829.1-P | Field mustard | plasma membrane | 61.36 | 61.25 |
| CDX73184 | Canola | plasma membrane | 58.54 | 61.07 |
| GSMUA_Achr11P... | Banana | plasma membrane | 43.75 | 60.24 |
| Solyc03g033610.1.1 | Tomato | plasma membrane, plastid | 59.51 | 59.93 |
| GSMUA_Achr11P... | Banana | plasma membrane | 44.28 | 56.77 |
| GSMUA_Achr8P12120_001 | Banana | plasma membrane, vacuole | 41.11 | 56.74 |
| OQU82190 | Sorghum | plasma membrane | 56.51 | 55.97 |
| Zm00001d002599_P002 | Maize | mitochondrion, plasma membrane | 54.93 | 54.98 |
| TraesCS2A01G397200.1 | Wheat | plasma membrane | 56.34 | 54.65 |
| TraesCS2B01G415500.1 | Wheat | plasma membrane | 56.16 | 54.58 |
| TraesCS2D01G395000.1 | Wheat | plasma membrane | 56.16 | 54.44 |
| Zm00001d026063_P001 | Maize | plasma membrane | 55.81 | 54.23 |
| HORVU2Hr1G094360.1 | Barley | plastid | 56.16 | 51.24 |
| Solyc02g072390.1.1 | Tomato | plastid | 8.45 | 32.43 |
| Solyc02g070910.1.1 | Tomato | nucleus, plasma membrane | 26.85 | 31.84 |
| Solyc02g070890.2.1 | Tomato | plasma membrane | 32.13 | 31.22 |
| Solyc03g112680.1.1 | Tomato | plasma membrane | 24.65 | 28.75 |
| Solyc05g007230.2.1 | Tomato | nucleus, plasma membrane | 31.43 | 28.56 |
Protein Annotations
Description
No Description!
Coordinates
chr4:+:65127422..65130832
Molecular Weight (calculated)
122761.0 Da
IEP (calculated)
6.022
GRAVY (calculated)
0.064
Length
1136 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTATFLLSP PLVVVALTWL LISVFSMAEN VTETEMEALM SFKRNLEDPL GVLDGWDLST SLAPCDWRGV LCGAGRVREL RLPGLQLSGR LTDQVGNLRQ
0101: LRRLSLHSNN FNGSVPRSLA QCALLRAVYF HYNSFSGELP PAISNLTNLQ VLNLAHNFLS GHVSGNVPAS LRFLDLSSNI LSGGIPGNFS ADSQLELLNL
0201: SFNRFSGEIP ASIGALQKLE YLWLDSNQLY GTIPSAISNI STLIHLSSSD NHLQGLIPAT IGSLSSLQVI TLSQNQLSGV VPASFFCNGS VNAHAIRIIE
0301: LSFNAITGLT KPENAACLSA LEVLTLHGNH INGVFPEWLT SFSSLKVLDI SGNAISGTLP NDIGNLRFLE ELRLGNNTLT GDIPSNIVNF GSLGVLDLGG
0401: NRFSGLIPQF LGKLTGLRML SLSGNRFSGS IPDSLGSLYQ LEFLDLSMND LNGSLPQNLM LLSNLTSLNL SSNLFYGEIP RGIGNLHGLE VLNVSNCGFS
0501: GNIPTSIGSL LRLTTLDVSK QNLSGELPFD IFGLPSLRVV ALQENMLTGD GLEGFSSLSG LEYLNLSSNA FYGQVPKTYG FLTSLKVLSM SNSGINGSIP
0601: AELGNCSGLQ VLELRGNKLT GQIPKDFSRL SHLRKLDLGH NGLTGEIPEN ISNCLSLATL LLDSNHISGH IPESLSKLSN LEMLDLSSNN LNGSIPSSLS
0701: LISSLRYLNI SHNHLEGEIP EALGSRFKDP SLFAANNDLC GKPLKECNDV RRKRKKLILF IVLAAVGAFF VAVFCCGYIY GLILWHKKLK GSAEGKKRSP
0801: GRTSSGGEGG RGSGENGGPK LVMFNNKITY AETLEATRQF DEENVLSRGK YGLVFKATFA DGMVLAIRRL PDTSIEVNTF RKEAESLGKV KHRNLTVVRG
0901: YYAGPPPDVR FVVYDYMPNG NLATLLQEAS HQDGHVLNWP MRHLIALGIA RGLAYLHSVS LIHGDVKPQN VLFDADFEAH LSDFGLDKLS LVATPAETST
1001: SSTPVGTLGY IAPEVALTGQ PTKEADVYSF GIVLLEILTG RKPVMFNGDE DIVKWVKRQL QRGQISELLE PGLLELDPES SEWEEFLLGI KVGLLCTMPD
1101: PLERPSMTDI VFMLEGCRVG PDIPSSADPT TLPSPM
0101: LRRLSLHSNN FNGSVPRSLA QCALLRAVYF HYNSFSGELP PAISNLTNLQ VLNLAHNFLS GHVSGNVPAS LRFLDLSSNI LSGGIPGNFS ADSQLELLNL
0201: SFNRFSGEIP ASIGALQKLE YLWLDSNQLY GTIPSAISNI STLIHLSSSD NHLQGLIPAT IGSLSSLQVI TLSQNQLSGV VPASFFCNGS VNAHAIRIIE
0301: LSFNAITGLT KPENAACLSA LEVLTLHGNH INGVFPEWLT SFSSLKVLDI SGNAISGTLP NDIGNLRFLE ELRLGNNTLT GDIPSNIVNF GSLGVLDLGG
0401: NRFSGLIPQF LGKLTGLRML SLSGNRFSGS IPDSLGSLYQ LEFLDLSMND LNGSLPQNLM LLSNLTSLNL SSNLFYGEIP RGIGNLHGLE VLNVSNCGFS
0501: GNIPTSIGSL LRLTTLDVSK QNLSGELPFD IFGLPSLRVV ALQENMLTGD GLEGFSSLSG LEYLNLSSNA FYGQVPKTYG FLTSLKVLSM SNSGINGSIP
0601: AELGNCSGLQ VLELRGNKLT GQIPKDFSRL SHLRKLDLGH NGLTGEIPEN ISNCLSLATL LLDSNHISGH IPESLSKLSN LEMLDLSSNN LNGSIPSSLS
0701: LISSLRYLNI SHNHLEGEIP EALGSRFKDP SLFAANNDLC GKPLKECNDV RRKRKKLILF IVLAAVGAFF VAVFCCGYIY GLILWHKKLK GSAEGKKRSP
0801: GRTSSGGEGG RGSGENGGPK LVMFNNKITY AETLEATRQF DEENVLSRGK YGLVFKATFA DGMVLAIRRL PDTSIEVNTF RKEAESLGKV KHRNLTVVRG
0901: YYAGPPPDVR FVVYDYMPNG NLATLLQEAS HQDGHVLNWP MRHLIALGIA RGLAYLHSVS LIHGDVKPQN VLFDADFEAH LSDFGLDKLS LVATPAETST
1001: SSTPVGTLGY IAPEVALTGQ PTKEADVYSF GIVLLEILTG RKPVMFNGDE DIVKWVKRQL QRGQISELLE PGLLELDPES SEWEEFLLGI KVGLLCTMPD
1101: PLERPSMTDI VFMLEGCRVG PDIPSSADPT TLPSPM
0001: MAATVIFFLH FAAIFFSRFH HTSAISSETQ ALTSFKLSLH DPLGALESWN QSSPSAPCDW HGVSCFSGRV RELRLPRLHL TGHLSPRLGE LTQLRKLSLH
0101: TNDINGAVPS SLSRCVFLRA LYLHYNSFSG DFPPEILNLR NLQVLNAAHN SLTGNLSDVT VSKSLRYVDL SSNAISGKIP ANFSADSSLQ LINLSFNHFS
0201: GEIPATLGQL QDLEYLWLDS NQLQGTIPSA LANCSSLIHF SVTGNHLTGL IPVTLGTIRS LQVISLSENS FTGTVPVSLL CGYSGYNSSM RIIQLGVNNF
0301: TGIAKPSNAA CVNPNLEILD IHENRINGDF PAWLTDLTSL VVLDISGNGF SGGVTAKVGN LMALQELRVA NNSLVGEIPT SIRNCKSLRV VDFEGNKFSG
0401: QIPGFLSQLR SLTTISLGRN GFSGRIPSDL LSLYGLETLN LNENHLTGAI PSEITKLANL TILNLSFNRF SGEVPSNVGD LKSLSVLNIS GCGLTGRIPV
0501: SISGLMKLQV LDISKQRISG QLPVELFGLP DLQVVALGNN LLGGVVPEGF SSLVSLKYLN LSSNLFSGHI PKNYGFLKSL QVLSLSHNRI SGTIPPEIGN
0601: CSSLEVLELG SNSLKGHIPV YVSKLSLLKK LDLSHNSLTG SIPDQISKDS SLESLLLNSN SLSGRIPESL SRLTNLTALD LSSNRLNSTI PSSLSRLRFL
0701: NYFNLSRNSL EGEIPEALAA RFTNPTVFVK NPGLCGKPLG IECPNVRRRR RRKLILLVTL AVAGALLLLL CCCGYVFSLW KWRNKLRLGL SRDKKGTPSR
0801: TSRASSGGTR GEDNNGGPKL VMFNNKITLA ETLEATRQFD EENVLSRGRY GLVFKATFRD GMVLSVRRLM DGASITDATF RNQAEALGRV KHKNITVLRG
0901: YYCGPPDLRL LVYDYMPNGN LATLLQEASH QDGHVLNWPM RHLIALGIAR GLSFLHSLSI IHGDLKPQNV LFDADFEAHL SEFGLDRLTA LTPAEEPSTS
1001: STPVGSLGYI APEAGLTGET SKESDVYSFG IVLLEILTGK KAVMFTEDED IVKWVKRQLQ KGQIVELLEP GLLELDPESS EWEEFLLGIK VGLLCTGGDV
1101: VDRPSMADVV FMLEGCRVGP AISLSADPTS PTSPAATAVS
0101: TNDINGAVPS SLSRCVFLRA LYLHYNSFSG DFPPEILNLR NLQVLNAAHN SLTGNLSDVT VSKSLRYVDL SSNAISGKIP ANFSADSSLQ LINLSFNHFS
0201: GEIPATLGQL QDLEYLWLDS NQLQGTIPSA LANCSSLIHF SVTGNHLTGL IPVTLGTIRS LQVISLSENS FTGTVPVSLL CGYSGYNSSM RIIQLGVNNF
0301: TGIAKPSNAA CVNPNLEILD IHENRINGDF PAWLTDLTSL VVLDISGNGF SGGVTAKVGN LMALQELRVA NNSLVGEIPT SIRNCKSLRV VDFEGNKFSG
0401: QIPGFLSQLR SLTTISLGRN GFSGRIPSDL LSLYGLETLN LNENHLTGAI PSEITKLANL TILNLSFNRF SGEVPSNVGD LKSLSVLNIS GCGLTGRIPV
0501: SISGLMKLQV LDISKQRISG QLPVELFGLP DLQVVALGNN LLGGVVPEGF SSLVSLKYLN LSSNLFSGHI PKNYGFLKSL QVLSLSHNRI SGTIPPEIGN
0601: CSSLEVLELG SNSLKGHIPV YVSKLSLLKK LDLSHNSLTG SIPDQISKDS SLESLLLNSN SLSGRIPESL SRLTNLTALD LSSNRLNSTI PSSLSRLRFL
0701: NYFNLSRNSL EGEIPEALAA RFTNPTVFVK NPGLCGKPLG IECPNVRRRR RRKLILLVTL AVAGALLLLL CCCGYVFSLW KWRNKLRLGL SRDKKGTPSR
0801: TSRASSGGTR GEDNNGGPKL VMFNNKITLA ETLEATRQFD EENVLSRGRY GLVFKATFRD GMVLSVRRLM DGASITDATF RNQAEALGRV KHKNITVLRG
0901: YYCGPPDLRL LVYDYMPNGN LATLLQEASH QDGHVLNWPM RHLIALGIAR GLSFLHSLSI IHGDLKPQNV LFDADFEAHL SEFGLDRLTA LTPAEEPSTS
1001: STPVGSLGYI APEAGLTGET SKESDVYSFG IVLLEILTGK KAVMFTEDED IVKWVKRQLQ KGQIVELLEP GLLELDPESS EWEEFLLGIK VGLLCTGGDV
1101: VDRPSMADVV FMLEGCRVGP AISLSADPTS PTSPAATAVS
Arabidopsis Description
F10A5.16 [Source:UniProtKB/TrEMBL;Acc:Q9LR04]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.