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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU82190 Sorghum plasma membrane 94.1 93.11
Os04t0576900-01 Rice plasma membrane 49.69 90.68
Zm00001d026063_P001 Maize plasma membrane 93.3 90.59
TraesCS2D01G395000.1 Wheat plasma membrane 83.52 80.89
TraesCS2B01G415500.1 Wheat plasma membrane 83.26 80.84
TraesCS2A01G397200.1 Wheat plasma membrane 83.26 80.7
HORVU2Hr1G094360.1 Barley plastid 83.44 76.06
GSMUA_Achr11P... Banana plasma membrane 51.45 70.79
GSMUA_Achr11P... Banana plasma membrane 54.8 70.2
GSMUA_Achr8P12120_001 Banana plasma membrane, vacuole 49.25 67.92
VIT_04s0023g03070.t01 Wine grape plasma membrane 59.3 59.56
KRH28774 Soybean plasma membrane 57.89 58.09
VIT_18s0001g13590.t01 Wine grape plasma membrane 54.8 56.91
KRH61075 Soybean plasma membrane 56.12 56.37
CDX75559 Canola plasma membrane 53.57 56.35
AT4G36180.1 Thale cress plasma membrane 56.39 56.34
Bra011668.1-P Field mustard plasma membrane 55.77 56.27
PGSC0003DMT400009520 Potato cytosol 54.45 56.13
Solyc02g084370.1.1 Tomato plasma membrane 55.59 55.99
KRH51753 Soybean plasma membrane 55.77 55.87
KRH08102 Soybean plasma membrane 54.54 55.82
KRH69809 Soybean plasma membrane 55.42 55.66
PGSC0003DMT400009133 Potato plasma membrane 55.24 55.63
CDX69210 Canola plasma membrane 52.69 55.58
Solyc04g081080.1.1 Tomato plasma membrane 54.98 54.93
PGSC0003DMT400058132 Potato plasma membrane 52.69 53.3
Solyc03g033610.1.1 Tomato plasma membrane, plastid 52.86 53.19
CDY47508 Canola plasma membrane 50.84 52.94
CDX73184 Canola plasma membrane 50.4 52.53
Bra015829.1-P Field mustard plasma membrane 52.25 52.11
AT1G75640.1 Thale cress plasma membrane 51.72 51.49
Zm00001d050076_P001 Maize extracellular, vacuole 8.72 32.35
Zm00001d002287_P001 Maize plasma membrane 31.45 30.0
Zm00001d037666_P001 Maize plasma membrane 25.73 29.89
Zm00001d050077_P001 Maize extracellular, vacuole 12.16 29.55
Zm00001d006420_P002 Maize plasma membrane 25.9 28.6
Os04t0576800-02 Rice plasma membrane 1.59 5.08
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.7Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1D6E248GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_4InterPro:Leu-rich_rpt_typical-subtypProteinID:ONM14733.1PFAM:PF00069PFAM:PF00560PFAM:PF12799
PFAM:PF13855PRINTS:PR00019ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR27000
PANTHER:PTHR27000:SF322InterPro:Prot_kinase_domSMART:SM00220SMART:SM00369SUPFAM:SSF52047SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0008451BBDEnsemblPlantsGene:Zm00001d002599EnsemblPlants:Zm00001d002599_P002
EnsemblPlants:Zm00001d002599_T002SEG:seg::::
Description
Probable LRR receptor-like serine/threonine-protein kinase
Coordinates
chr2:-:16416722..16420200
Molecular Weight (calculated)
119394.0 Da
IEP (calculated)
5.005
GRAVY (calculated)
0.094
Length
1135 amino acids
Sequence
(BLAST)
0001: MPPSRSLFLL LMLALAPLAS LTAPAPAPVA RTAGVQAEID ALLAFRRGLR DPYGAMSGWD AASPPRPAPG AASPLGSLPY LERLSLRSND LSGAIPPSLA
0101: RVTSLRAVFL QSNSLSGPIP QSFLANLTSL DTFDVSGNLL SGPVPVSLPP SLKYLDLSSN AFSGTIPSNI SASTASLQFL NLSFNRLRGT VPASLGNLQD
0201: LHYLWLDGNL LEGTIPAALA NCSALLHLSL QGNSLRGILP SAVAAIPTLQ ILSVSRNQLT GAIPAAAFGR QGNSSLRIVQ LGGNEFSQVD VPGGLAADLQ
0301: VVDLGGNKLA GPFPAWLAGA GGLTLLDLSG NAFTGELPPA LGQLTALLEL RLGGNAFAGA VPAEIGRCGA LQVLDLEDNH FTGEVPSALG GLPRLREVYL
0401: GGNTFSGEIP ASLGNLSWLE ALSIPRNRLT GGLSGELFQL GNLTFLDLSE NNLAGEIPLA IGNLLALQSL NLSGNAFSGH IPTTISNLQN LRVLDLSGQK
0501: NLSGNVPAEL FGLPQLQYVS FADNSFSGDV PEGFSSLWSL RDLNLSGNSF TGSIPATYGY LPSLQVLSAS HNHISGELPP ELANCSNLTV LELSGNQLTG
0601: SIPSDLSRLG ELEELDLSYN QFSGKIPPEI SNCSSLTLLK LDDNRIGGDI PASIANLSKL QTLDLSSNNL TGSIPASLAQ IPGLVSFNVS HNELSGEIPA
0701: MLGSRFGSAS AYASNPDLCG PPLESECGEQ RRRQRRQKVQ RLALLIGVVA AAVLLLALLC CCCVFSLLRW RRRFIESRDG VKKRRRSPGR GSGSSGTSTE
0801: NGVSQPKLIM FNSRITYADT VEATRQFDEE NVLSRGRHGL VFKACYSDGT VLAILRLPST SADGAVVIDE GSFRKEAESL GKVKHRNLTV LRGYYAGPPP
0901: DVRLLVYDYM PNGNLATLLQ EASHQDGHIL NWPMRHLIAL GVSRGLAFLH QSGVVHGDVK PQNILFDADF EPHLSDFGLE PMVVTAGAAA AAAAASTSAA
1001: TPVGSLGYVA PDAAAAGQAT REGDVYSFGI VLLELLTGRR PGIFAGEEED IVKWVKRQLQ RGAVAELLEP GLLELDPESS EWEEFLLGIK VGLLCTASDP
1101: LDRPAMGDVV FMLEGCRVGP DIPSSADPTS QPSPA
Best Arabidopsis Sequence Match ( AT4G36180.1 )
(BLAST)
0001: MAMDISLFFI FLVIYAPLVS YADESQAEID ALTAFKLNLH DPLGALTSWD PSTPAAPCDW RGVGCTNHRV TEIRLPRLQL SGRISDRISG LRMLRKLSLR
0101: SNSFNGTIPT SLAYCTRLLS VFLQYNSLSG KLPPAMRNLT SLEVFNVAGN RLSGEIPVGL PSSLQFLDIS SNTFSGQIPS GLANLTQLQL LNLSYNQLTG
0201: EIPASLGNLQ SLQYLWLDFN LLQGTLPSAI SNCSSLVHLS ASENEIGGVI PAAYGALPKL EVLSLSNNNF SGTVPFSLFC NTSLTIVQLG FNAFSDIVRP
0301: ETTANCRTGL QVLDLQENRI SGRFPLWLTN ILSLKNLDVS GNLFSGEIPP DIGNLKRLEE LKLANNSLTG EIPVEIKQCG SLDVLDFEGN SLKGQIPEFL
0401: GYMKALKVLS LGRNSFSGYV PSSMVNLQQL ERLNLGENNL NGSFPVELMA LTSLSELDLS GNRFSGAVPV SISNLSNLSF LNLSGNGFSG EIPASVGNLF
0501: KLTALDLSKQ NMSGEVPVEL SGLPNVQVIA LQGNNFSGVV PEGFSSLVSL RYVNLSSNSF SGEIPQTFGF LRLLVSLSLS DNHISGSIPP EIGNCSALEV
0601: LELRSNRLMG HIPADLSRLP RLKVLDLGQN NLSGEIPPEI SQSSSLNSLS LDHNHLSGVI PGSFSGLSNL TKMDLSVNNL TGEIPASLAL ISSNLVYFNV
0701: SSNNLKGEIP ASLGSRINNT SEFSGNTELC GKPLNRRCES STAEGKKKKR KMILMIVMAA IGAFLLSLFC CFYVYTLLKW RKKLKQQSTT GEKKRSPGRT
0801: SAGSRVRSST SRSSTENGEP KLVMFNNKIT LAETIEATRQ FDEENVLSRT RYGLLFKANY NDGMVLSIRR LPNGSLLNEN LFKKEAEVLG KVKHRNITVL
0901: RGYYAGPPDL RLLVYDYMPN GNLSTLLQEA SHQDGHVLNW PMRHLIALGI ARGLGFLHQS NMVHGDIKPQ NVLFDADFEA HISDFGLDRL TIRSPSRSAV
1001: TANTIGTLGY VSPEATLSGE ITRESDIYSF GIVLLEILTG KRPVMFTQDE DIVKWVKKQL QRGQVTELLE PGLLELDPES SEWEEFLLGI KVGLLCTATD
1101: PLDRPTMSDV VFMLEGCRVG PDVPSSADPT SQPSPA
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.