Factsheet for Os04t0576900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
extracellular: 24083427
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002599_P002	Maize	mitochondrion, plasma membrane	90.68	49.69
OQU82190	Sorghum	plasma membrane	89.39	48.47
GSMUA_Achr11P...	Banana	plasma membrane	63.67	48.0
GSMUA_Achr8P12120_001	Banana	plasma membrane, vacuole	63.18	47.75
Zm00001d026063_P001	Maize	plasma membrane	89.07	47.39
TraesCS2B01G415500.1	Wheat	plasma membrane	88.59	47.13
TraesCS2D01G395000.1	Wheat	plasma membrane	88.59	47.01
TraesCS2A01G397200.1	Wheat	plasma membrane	88.26	46.88
HORVU2Hr1G094360.1	Barley	plastid	88.75	44.34
GSMUA_Achr11P...	Banana	plasma membrane	60.93	42.78
VIT_04s0023g03070.t01	Wine grape	plasma membrane	67.36	37.08
KRH28774	Soybean	plasma membrane	65.11	35.81
CDX75559	Canola	plasma membrane	61.9	35.68
CDX69210	Canola	plasma membrane	61.25	35.41
KRH08102	Soybean	plasma membrane	62.06	34.81
KRH69809	Soybean	plasma membrane	63.18	34.78
AT4G36180.1	Thale cress	plasma membrane	63.5	34.77
PGSC0003DMT400009133	Potato	plasma membrane	62.86	34.69
Solyc02g084370.1.1	Tomato	plasma membrane	62.7	34.61
Bra011668.1-P	Field mustard	plasma membrane	61.74	34.13
PGSC0003DMT400058132	Potato	plasma membrane	60.61	33.6
Solyc03g033610.1.1	Tomato	plasma membrane, plastid	60.93	33.6
Os04t0618700-01	Rice	plasma membrane	31.03	16.31
Os07t0498400-00	Rice	plasma membrane	32.64	15.92
Os06t0585982-00	Rice	plasma membrane	28.14	15.75
Os05t0170300-00	Rice	extracellular, plasma membrane, plastid	19.29	11.54
Os08t0446400-01	Rice	extracellular	2.09	3.17
Os04t0576800-02	Rice	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009742	GO:GO:0009791
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0090696	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	EnsemblPlantsGene:Os04g0576900	EnsemblPlants:Os04t0576900-01	PFAM:PF00069	PFAM:PF13855
PRINTS:PR00019	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF322
InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0000DD921C	SEG:seg	:	:	:

Description

LRR-RLK protein XIAOProtein kinase, core domain containing protein. (Os04t0576900-01)

Coordinates

chr4:+:29084153..29086526

Molecular Weight (calculated)

67054.2 Da

IEP (calculated)

5.930

GRAVY (calculated)

-0.071

Length

622 amino acids

Sequence
(BLAST)

001: LPQLQYVSLA GNSFSGDVPE GFSSLWSLRH LNLSVNSFTG SMPATYGYLP SLQVLSASHN RICGELPVEL ANCSNLTVLD LRSNQLTGPI PGDFARLGEL
101: EELDLSHNQL SRKIPPEISN CSSLVTLKLD DNHLGGEIPA SLSNLSKLQT LDLSSNNLTG SIPASLAQIP GMLSLNVSQN ELSGEIPAML GSRFGTPSVF
201: ASNPNLCGPP LENECSAYRQ HRRRQRLQRL ALLIGVVAAT VLLLVLFCCC CVYSLLRWRR RFIEKRDGVK KRRRSPGRGS GSSGTSTDSV SQPKLIMFNS
301: RITYADTVEA TRQFDEENVL SRGRHGLVFK ACYNDGTVLA ILRLPSTSSD GAVVIEEGSF RKEAESLGKV KHRNLTVLRG YYAGPPPDVR LLVYDYMPNG
401: NLATLLQEAS HQDGHILNWP MRHLIALGVS RGLAFLHQSG VVHGDVKPQN ILFDADFEPH LSDFGLEPMV VTAGAAAAAA AASTSATTTV GSLGYVAPDA
501: AAAGQATREG DVYSFGIVLL ELLTGRRPGM FAGEDEDIVK WVKRQLQRGA VAELLEPGLL ELDPESSEWE EFLLGIKVGL LCTAPDPLDR PAMGDVVFML
601: EGCRVGPDIP SSADPTSQPS PA

Best Arabidopsis Sequence Match ( AT4G36180.1 )
(BLAST)

0001: MAMDISLFFI FLVIYAPLVS YADESQAEID ALTAFKLNLH DPLGALTSWD PSTPAAPCDW RGVGCTNHRV TEIRLPRLQL SGRISDRISG LRMLRKLSLR
0101: SNSFNGTIPT SLAYCTRLLS VFLQYNSLSG KLPPAMRNLT SLEVFNVAGN RLSGEIPVGL PSSLQFLDIS SNTFSGQIPS GLANLTQLQL LNLSYNQLTG
0201: EIPASLGNLQ SLQYLWLDFN LLQGTLPSAI SNCSSLVHLS ASENEIGGVI PAAYGALPKL EVLSLSNNNF SGTVPFSLFC NTSLTIVQLG FNAFSDIVRP
0301: ETTANCRTGL QVLDLQENRI SGRFPLWLTN ILSLKNLDVS GNLFSGEIPP DIGNLKRLEE LKLANNSLTG EIPVEIKQCG SLDVLDFEGN SLKGQIPEFL
0401: GYMKALKVLS LGRNSFSGYV PSSMVNLQQL ERLNLGENNL NGSFPVELMA LTSLSELDLS GNRFSGAVPV SISNLSNLSF LNLSGNGFSG EIPASVGNLF
0501: KLTALDLSKQ NMSGEVPVEL SGLPNVQVIA LQGNNFSGVV PEGFSSLVSL RYVNLSSNSF SGEIPQTFGF LRLLVSLSLS DNHISGSIPP EIGNCSALEV
0601: LELRSNRLMG HIPADLSRLP RLKVLDLGQN NLSGEIPPEI SQSSSLNSLS LDHNHLSGVI PGSFSGLSNL TKMDLSVNNL TGEIPASLAL ISSNLVYFNV
0701: SSNNLKGEIP ASLGSRINNT SEFSGNTELC GKPLNRRCES STAEGKKKKR KMILMIVMAA IGAFLLSLFC CFYVYTLLKW RKKLKQQSTT GEKKRSPGRT
0801: SAGSRVRSST SRSSTENGEP KLVMFNNKIT LAETIEATRQ FDEENVLSRT RYGLLFKANY NDGMVLSIRR LPNGSLLNEN LFKKEAEVLG KVKHRNITVL
0901: RGYYAGPPDL RLLVYDYMPN GNLSTLLQEA SHQDGHVLNW PMRHLIALGI ARGLGFLHQS NMVHGDIKPQ NVLFDADFEA HISDFGLDRL TIRSPSRSAV
1001: TANTIGTLGY VSPEATLSGE ITRESDIYSF GIVLLEILTG KRPVMFTQDE DIVKWVKKQL QRGQVTELLE PGLLELDPES SEWEEFLLGI KVGLLCTATD
1101: PLDRPTMSDV VFMLEGCRVG PDVPSSADPT SQPSPA

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.