Factsheet for Os08t0446400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050076_P001	Maize	extracellular, vacuole	49.27	66.01
Zm00001d050077_P001	Maize	extracellular, vacuole	61.71	54.18
OQU80566	Sorghum	extracellular	50.24	49.28
OQU80565	Sorghum	extracellular	30.24	37.8
AT1G73066.1	Thale cress	extracellular, plasma membrane	48.29	33.11
CDX96448	Canola	extracellular	47.56	32.28
Bra016019.1-P	Field mustard	extracellular, golgi	47.32	32.12
CDY59934	Canola	extracellular	46.83	32.11
Bra037450.1-P	Field mustard	cytosol	8.78	31.03
Os05t0170300-00	Rice	extracellular, plasma membrane, plastid	33.41	13.17
Os04t0618700-01	Rice	plasma membrane	31.95	11.07
Os06t0585982-00	Rice	plasma membrane	27.8	10.26
Os07t0498400-00	Rice	plasma membrane	30.98	9.96
Os04t0576800-02	Rice	plasma membrane	2.93	3.39
Os04t0576900-01	Rice	plasma membrane	3.17	2.09
KRH42318	Soybean	plasma membrane	0.98	1.32

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	ProteinID:BAF23841.1	ProteinID:BAT05669.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	EnsemblPlantsGene:Os08g0446400	EnsemblPlants:Os08t0446400-01	PFAM:PF08263
PFAM:PF13855	PANTHER:PTHR27000	PANTHER:PTHR27000:SF185	UniProt:Q0J5C4	SUPFAM:SSF52047	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0000DD9541	SEG:seg	:	:	:

Description

Leucine-rich repeat, N-terminal domain containing protein. (Os08t0446400-01)

Coordinates

chr8:-:21768923..21770635

Molecular Weight (calculated)

44668.3 Da

IEP (calculated)

4.952

GRAVY (calculated)

0.270

Length

410 amino acids

Sequence
(BLAST)

001: MGLHIWCWLV VLFSLAPLCC SLSADGLALL DLAKTLILPS SISSNWSADD ATPCTWKGVD CDEMSNVVSL NLSYSGLSGS LGPQIGLMKH LKVIDLSGNG
101: ISGPMPSSIG NCTKLEVLHL LRNRLSGILP DTLSNIEALR VFDLSRNSFT GKVNFRFENC KLEEFILSFN YLRGEIPVWI GNCSSLTQLA FVNNSITGQI
201: PSSIGLLRNL SYLVLSQNSL SGTIPPEIGN CQLLIWLHLD ANQLEGTIPK ELANLRNLQK LYLFENCLTG EFPEDIWGIQ SLLSVDIYKN NFTGQLPIVL
301: AEMKQLQQIT LFNNSFTGVI PQGLGVNSSL SVIDFINNSF VGTIPPKICS GGRLEVLNLG SNLLNGSIPS GIADCPTLRR VILNQNNLIG SIPQFVNCSS
401: LNYIDLSYNL

Best Arabidopsis Sequence Match ( AT1G73066.1 )
(BLAST)

001: MENLGLFQIL LLFCLFVSVR IVSVSCLNSD GLTLLSLRKH LDKVPPELTS TWKTNASEAT PCNWFGIICD DSKKVTSLNF TGSGVSGQLG PEIGQLKSLE
101: ILDMSSNNFS GIIPSSLGNC SSLVYIDLSE NSFSGKVPDT LGSLKSLADL YLYSNSLTGE LPKSLFRIPV LNYLHVEHNN LTGLIPQNVG EAKELLHLRL
201: FDNQFTGTIP ESIGNCSKLE ILYLHKNKLV GSLPASLNLL ESLTDLFVAN NSLRGTVQFG STKCRNLVTL DLSYNEFEGG VPPELGNCSS LDALVIVSGN
301: LSGTIPSSLG MLKNLTILNL SENRLSGSIP AELGNCSSLN LLKLNDNQLV GGIPSALGKL RKLESLELFE NRFSGEIPIE IWKIQSLTQL LVYRNNLTGK
401: LPEEITKLKN LKIVTLFNNS FYGVIPPNLG LNSNLEIIDF IGNNFTGEIP RNLCHGKMLT VFNLGSNRLH GKIPASVSQC KTLSRFILRE NNLSGFLPKF
501: SKNQDLSFLD LNSNSFEGPI PRSLGSCRNL TTINLSRNKL TRNIPRELEN LQNLSHLNLG SNLLNGTVPS KFSNWKELTT LVLSGNRFSG FVPPDRHS

Arabidopsis Description

Highly similar to receptor-like protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9SSM0]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.