Factsheet for Os04t0576800-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G094360.1	Barley	plastid	10.73	3.05
GSMUA_Achr8P12120_001	Banana	plasma membrane, vacuole	7.06	3.04
GSMUA_Achr11P...	Banana	plasma membrane	7.06	3.03
Os08t0446400-01	Rice	extracellular	3.39	2.93
TraesCS2D01G395000.1	Wheat	plasma membrane	8.47	2.56
GSMUA_Achr11P...	Banana	plasma membrane	5.93	2.37
TraesCS2B01G415500.1	Wheat	plasma membrane	7.63	2.31
TraesCS2A01G397200.1	Wheat	plasma membrane	7.34	2.22
VIT_04s0023g03070.t01	Wine grape	plasma membrane	7.06	2.21
OQU82190	Sorghum	plasma membrane	7.06	2.18
Zm00001d026063_P001	Maize	plasma membrane	7.06	2.14
Os05t0170300-00	Rice	extracellular, plasma membrane, plastid	6.21	2.12
KRH08102	Soybean	plasma membrane	5.65	1.8
KRH28774	Soybean	plasma membrane	5.65	1.77
CDX69210	Canola	plasma membrane	5.37	1.77
CDX75559	Canola	plasma membrane	5.37	1.76
Bra011668.1-P	Field mustard	plasma membrane	5.37	1.69
PGSC0003DMT400009133	Potato	plasma membrane	5.37	1.69
Solyc02g084370.1.1	Tomato	plasma membrane	5.37	1.69
KRH69809	Soybean	plasma membrane	5.37	1.68
AT4G36180.1	Thale cress	plasma membrane	5.37	1.67
Zm00001d002599_P002	Maize	mitochondrion, plasma membrane	5.08	1.59
PGSC0003DMT400058132	Potato	plasma membrane	4.8	1.52
Solyc03g033610.1.1	Tomato	plasma membrane, plastid	4.8	1.51
Os04t0618700-01	Rice	plasma membrane	3.95	1.18
Os06t0585982-00	Rice	plasma membrane	3.39	1.08
Os07t0498400-00	Rice	plasma membrane	3.67	1.02
Os04t0576900-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

InterPro:3-oxo-5_a-steroid_4-DH_C	EntrezGene:4336740	MapMan:50.1.3	EMBL:AK073542	EMBL:AK104042	ProteinID:BAF15541.1
ProteinID:BAS90610.1	ProteinID:CAD41302.2	ProteinID:EAZ31716.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016627	GO:GO:0019538
GO:GO:0055114	GO:GO:0102389	InterPro:IPR001104	EnsemblPlantsGene:Os04g0576800	EnsemblPlants:Os04t0576800-02	PFAM:PF02544
PFscan:PS50244	PANTHER:PTHR14624	UniProt:Q7XUH5	TMHMM:TMhelix	UniParc:UPI00001B16EB	RefSeq:XP_015633510.1
RefSeq:XP_015633511.1	SEG:seg	:	:	:	:

Description

Similar to predicted protein. (Os04t0576800-01);3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os04t0576800-02);3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os04t0576800-03)

Coordinates

chr4:+:29071860..29076269

Molecular Weight (calculated)

39868.8 Da

IEP (calculated)

8.882

GRAVY (calculated)

0.361

Length

354 amino acids

Sequence
(BLAST)

001: METEGWPALQ PLLCLAWIAT TLPIIVAALP IPAAAGGHLL RRLLSAFSSR GKTVRPSPAS SSGSSSSKAK FTVPQKYFMH FYVVGVLATT ILLLAIWFYA
101: YMKMTPLLPE SSSYSTIASH LVGSNSFSFG RVHSRTMGHK YHVWRTVFVL LLMEIQVLRR LYETEHVFHY SPSARMHIVG YLTGLFYYVA APLSLASSCI
201: PEAAEYLQGQ VAEFIVKGRA RMPDLVIDSS SLLQPLLKLG WTQWIGAVIF IWGSLHQIRC HAILGTLREH KDSDEYVIPC GDWFNRVSCP HYLAELVIYF
301: GMLVASGGED IPVWFLFVFV ITNLSFAAVE THKWYLQKFE DYPRSRYAII PFVC

Best Arabidopsis Sequence Match ( AT2G16530.1 )
(BLAST)

001: MVELEIVWLV RGAWITVWIV SILPLVIASI PTSKLNSFRE LVLSFAGRGK ILHPSSQKFT IPQKCFAHFY VIGVVWTTLL LAATWMYACK MAPLSSEEFQ
101: LSDIASRLAG GSDVFSVHKS NMTPVEHRFK VWRAVFLLLL MEIHVLRRLI ESFYVFKYSP SARMHILGYF AGLFFYVTAP LSLCSNIAPE VAGFVGNQVA
201: EFIANGKSHT SAPEFNLLSS ISPLMKLGSL QWIGGAIFLW GWIHQRRCHA ILGSLRENPS QAKEYIIPYG DWFGMVSSPH FLAEIVLYAG LLIASGGTDI
301: TIWLLFGFVA ANLTYAAGET HRWYLRKFEN YPANRHAIFP YVY

Arabidopsis Description

3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:TAIR;Acc:AT2G16530]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.