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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47508 Canola plasma membrane 95.59 95.5
AT1G75640.1 Thale cress plasma membrane 85.4 81.58
VIT_18s0001g13590.t01 Wine grape plasma membrane 62.44 62.21
KRH61075 Soybean plasma membrane 63.18 60.88
KRH51753 Soybean plasma membrane 62.53 60.11
PGSC0003DMT400009520 Potato cytosol 60.61 59.95
CDX75559 Canola plasma membrane 59.05 59.59
CDX69210 Canola plasma membrane 58.31 59.01
Solyc04g081080.1.1 Tomato plasma membrane 61.07 58.54
GSMUA_Achr11P... Banana plasma membrane 39.58 52.24
OQU82190 Sorghum plasma membrane 53.81 51.09
GSMUA_Achr8P12120_001 Banana plasma membrane, vacuole 38.38 50.79
GSMUA_Achr11P... Banana plasma membrane 41.23 50.68
Zm00001d026063_P001 Maize plasma membrane 54.18 50.47
Zm00001d002599_P002 Maize mitochondrion, plasma membrane 52.53 50.4
TraesCS2B01G415500.1 Wheat plasma membrane 54.09 50.38
TraesCS2A01G397200.1 Wheat plasma membrane 54.09 50.3
TraesCS2D01G395000.1 Wheat plasma membrane 53.9 50.09
HORVU2Hr1G094360.1 Barley plastid 54.27 47.47
CDY59934 Canola extracellular 16.53 30.1
CDX96448 Canola extracellular 16.53 29.8
CDY03225 Canola plasma membrane 29.02 29.78
CDY35158 Canola plasma membrane 23.51 29.63
CDY39388 Canola plasma membrane 25.07 29.23
CDX87723 Canola plasma membrane 25.53 29.05
CDY49822 Canola plasma membrane 26.63 28.71
CDY50061 Canola plasma membrane 23.05 27.77
CDX78976 Canola plasma membrane 23.14 26.75
CDY43966 Canola cytosol 8.26 26.71
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.7Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078CAG5EnsemblPlants:CDX73184
ProteinID:CDX73184ProteinID:CDX73184.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00103674001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF07714PFAM:PF08263PFAM:PF13516PFAM:PF13855
PRINTS:PR00019ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27000PANTHER:PTHR27000:SF26InterPro:Prot_kinase_dom
SMART:SM00220SMART:SM00369SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF3CEASEG:seg::
Description
BnaC06g36320D
Coordinates
chrLK031797:-:2584660..2588079
Molecular Weight (calculated)
117587.0 Da
IEP (calculated)
7.692
GRAVY (calculated)
0.040
Length
1089 amino acids
Sequence
(BLAST)
0001: MAATVIFFLH FTFFAAVFLH TSAVSPETQA LTSLKLSLRD PLGALETWNE SSPSAPCDWH GVLCFSGRVR ELLLPRLRLA GRLSPRLGEN LQVLNAAHNS
0101: LTGSIANVTV SKTLRHVDLS SNAFSGAIPA SFSPESSLHL LNLSYNRFSG EIPASLGHLQ SLEYLSLESN HLQGTIPSAL SNCSSLIHFT AAVNSLTGLV
0201: PTTLGKIPTL QVISLSQNSL TGTVPASLLC GYSGYNNSSS MRIVQLGVNN FTGLATPSNA ACVNPNLEIL DLHENNIDHE FPTWLLTGLT SLIVLDISGN
0301: GLTGEFPAKI GSFTALQELR AANNSFLGEI PTTIGECRSL RVVDFEGNKL SGQVPGFLSR LQSLTALSLG RNGFSGRIPS DLLRLNGLEA LSLNENRLTG
0401: DIPSEITKLA NLSVLNLSFN RFSGEIPSNV GDLKSLSVLN LSGCGLTGRI PVSISGLMNL RVLDLSKQRI SGELPVELFG LPDLQVVALG SNGLNGVVPE
0501: GFSSLVSLRF LNLSSNLFSG RIPTNYGFLK SLQVLSLSRN RISGSVPAEI GNCSSLEVLE LGSNRLQGHI PVRLLKLSHL KKLDLSHNKL TGDIPVQMSK
0601: DSSLETLLLN SNSLSGPIPE SLSRLRNLTG LDLSSNRFNS TIPASLSRLH SLNYLNLSRN RLEGEIPQAL AARFNNTSVF SNNPRLCGKP LGLECENVRR
0701: RRRRKLILLV TLAAAGALLL LLCCCGYVFS LWRWRKKIRL GLGWDKKGTP SRTSGTSSGG TRGEDNNGGP KLVMFNNKIT LAETLEATRQ FDEENVLSRG
0801: RYGLVFKATF KDGMVLSVRR LMDGASITDA TFRNQAEALG RVKHKNITVL RGYYCGPPDL RLLVYDYMPN GNLSTLLQEA SHQDGHVLNW PMRHLIALGI
0901: ARGLSFLHSL SIVHGDLKPQ NVLFDADFEA HLSEFGLDRL TALTPAEEPS TSSTPVGSLG YIAPEAGLTG QTSKESDVYS FGIVLLEILT GKKAVMFTED
1001: EDIVKWVKRQ LQKGQIVELL EPGLLELDPE SSEWEEFLLG IKVGLLCTGG DVVDRPSMAD VVFMLEGCRV GPAISLSADP TSPAAEAAS
Best Arabidopsis Sequence Match ( AT1G75640.1 )
(BLAST)
0001: MAATVIFFLH FAAIFFSRFH HTSAISSETQ ALTSFKLSLH DPLGALESWN QSSPSAPCDW HGVSCFSGRV RELRLPRLHL TGHLSPRLGE LTQLRKLSLH
0101: TNDINGAVPS SLSRCVFLRA LYLHYNSFSG DFPPEILNLR NLQVLNAAHN SLTGNLSDVT VSKSLRYVDL SSNAISGKIP ANFSADSSLQ LINLSFNHFS
0201: GEIPATLGQL QDLEYLWLDS NQLQGTIPSA LANCSSLIHF SVTGNHLTGL IPVTLGTIRS LQVISLSENS FTGTVPVSLL CGYSGYNSSM RIIQLGVNNF
0301: TGIAKPSNAA CVNPNLEILD IHENRINGDF PAWLTDLTSL VVLDISGNGF SGGVTAKVGN LMALQELRVA NNSLVGEIPT SIRNCKSLRV VDFEGNKFSG
0401: QIPGFLSQLR SLTTISLGRN GFSGRIPSDL LSLYGLETLN LNENHLTGAI PSEITKLANL TILNLSFNRF SGEVPSNVGD LKSLSVLNIS GCGLTGRIPV
0501: SISGLMKLQV LDISKQRISG QLPVELFGLP DLQVVALGNN LLGGVVPEGF SSLVSLKYLN LSSNLFSGHI PKNYGFLKSL QVLSLSHNRI SGTIPPEIGN
0601: CSSLEVLELG SNSLKGHIPV YVSKLSLLKK LDLSHNSLTG SIPDQISKDS SLESLLLNSN SLSGRIPESL SRLTNLTALD LSSNRLNSTI PSSLSRLRFL
0701: NYFNLSRNSL EGEIPEALAA RFTNPTVFVK NPGLCGKPLG IECPNVRRRR RRKLILLVTL AVAGALLLLL CCCGYVFSLW KWRNKLRLGL SRDKKGTPSR
0801: TSRASSGGTR GEDNNGGPKL VMFNNKITLA ETLEATRQFD EENVLSRGRY GLVFKATFRD GMVLSVRRLM DGASITDATF RNQAEALGRV KHKNITVLRG
0901: YYCGPPDLRL LVYDYMPNGN LATLLQEASH QDGHVLNWPM RHLIALGIAR GLSFLHSLSI IHGDLKPQNV LFDADFEAHL SEFGLDRLTA LTPAEEPSTS
1001: STPVGSLGYI APEAGLTGET SKESDVYSFG IVLLEILTGK KAVMFTEDED IVKWVKRQLQ KGQIVELLEP GLLELDPESS EWEEFLLGIK VGLLCTGGDV
1101: VDRPSMADVV FMLEGCRVGP AISLSADPTS PTSPAATAVS
Arabidopsis Description
F10A5.16 [Source:UniProtKB/TrEMBL;Acc:Q9LR04]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.