Factsheet for GSMUA_Achr4P12250_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P20870_001
GSMUA_Achr4P22090_001
GSMUA_Achr5P14740_001
GSMUA_Achr7P01890_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46570.1	GSMUA_Achr4P20870_001	AT2G22680.1	21798944
AT5G46570.1	GSMUA_Achr4P22090_001	AT2G22680.1	21798944
AT5G46570.1	GSMUA_Achr5P14740_001	AT2G22680.1	21798944
AT5G46570.1	GSMUA_Achr7P01890_001	AT2G22680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P05600_001	Banana	cytosol	90.0	91.65
GSMUA_Achr11P...	Banana	cytosol	88.0	89.43
VIT_02s0012g01140.t01	Wine grape	cytosol	84.8	85.66
PGSC0003DMT400004190	Potato	cytosol	82.8	84.15
KRH57593	Soybean	cytosol, endoplasmic reticulum, mitochondrion	81.8	82.46
TraesCS1B01G192300.3	Wheat	cytosol	83.0	82.02
TraesCS1D01G194300.1	Wheat	cytosol	82.8	81.82
KRH04312	Soybean	cytosol	81.0	81.33
TraesCS1A01G190200.2	Wheat	cytosol	83.0	81.21
EER94456	Sorghum	cytosol	81.6	80.79
Os10t0571300-01	Rice	plasma membrane	82.6	80.66
AT5G46570.1	Thale cress	cytosol	78.4	80.16
Zm00001d030021_P001	Maize	cytosol	80.8	80.0
CDY33480	Canola	cytosol	77.8	79.55
CDX77672	Canola	cytosol	77.8	79.55
Bra025014.1-P	Field mustard	cytosol	77.8	79.55
CDX78818	Canola	cytosol	75.8	76.41
Zm00001d047053_P004	Maize	cytosol	81.0	76.13
CDY44497	Canola	cytosol	75.4	76.01
Bra013274.1-P	Field mustard	cytosol	75.4	76.01
HORVU1Hr1G049860.2	Barley	mitochondrion	83.0	71.8
GSMUA_Achr11P...	Banana	cytosol	42.6	62.65
GSMUA_Achr8P02400_001	Banana	plastid	59.0	60.08
CDY01510	Canola	cytosol	56.8	59.54
GSMUA_Achr5P11610_001	Banana	cytosol	59.4	59.16
CDY01511	Canola	cytosol	41.6	59.09
GSMUA_Achr10P...	Banana	mitochondrion, plastid	58.2	58.67
GSMUA_Achr1P15240_001	Banana	cytosol	57.2	58.13
CDX90430	Canola	cytosol	41.4	57.66
GSMUA_Achr4P29650_001	Banana	cytosol	57.6	57.37
GSMUA_Achr5P19040_001	Banana	plasma membrane	58.4	56.05
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	56.2	54.78
GSMUA_Achr1P02160_001	Banana	cytosol	45.8	42.25

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G12250_001	EnsemblPlants:GSMUA_Achr4P12250_001	EnsemblPlants:GSMUA_Achr4T12250_001	InterPro:IPR000719
InterPro:IPR011990	InterPro:Kinase-like_dom_sf	UniProt:M0SN90	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF260	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf
UniParc:UPI000294CF6B	:	:	:	:	:

Description

Probable serine/threonine-protein kinase At4g35230 [Source:GMGC_GENE;Acc:GSMUA_Achr4G12250_001]

Coordinates

chr4:+:9046467..9054030

Molecular Weight (calculated)

56008.9 Da

IEP (calculated)

6.072

GRAVY (calculated)

-0.380

Length

500 amino acids

Sequence
(BLAST)

001: MGCFHSKTTN VQSPDEESLP ADKPDLPNGD AGEQDQVPAF KEYGLAELRA ATKGFSPEMI VSESGEKAPN VVYRGNLDGG RLVAVKRFSK QSWPDAQQFV
101: TEAAGVGKLR HTRLVNLIGC CAEGDERLLV AEFMPNDTLS KHLFHWDKHP LPWQMRVRVA FYIAQALDHC NTENRRIYHD LNAYRVLFDE NYIIRDLHQD
201: GDPRLSSFGL IKNSRDGKSY STNLAYTPPE FMRTGRVIPE SVIYSYGTIL LDLLSGKHIP PSHALDLIRG KNMLLIMDSS LEGQYANEDA TKLVELASKC
301: LQFEARDRPN SKFLLSSVEP LQTQKEVPSH VLMGITKAPQ VLPTMLSPLG KACAKMDLTA VHDILLKTGY KDEEGAENEL SFQEWTQQVQ EMLNTKKFGD
401: IAFRDKDFKS AIEYYSKLVA MMSVPSATVF ARRGLSYLMS GQPELALRDA MQAQVCMPEW PTAFYLQALA LSKLGMETDA QDMLNDGAAF EAKRQNGWHG

Best Arabidopsis Sequence Match ( AT5G46570.1 )
(BLAST)

001: MGCLHSKTAN LPSSDDPSAP NKPESVNGDQ VDQEIQNFKE FELNELRKAT NGFSPSCIVS EGGEKAPNVV YRGKLEGNHL VAIKRFSRQS WPDAQQFVVE
101: ATGVGKLRNK RIVSLIGCCA EGDERLLVAE YMPNDTLSKH LFHWEKQPLP WDMRVRIADY IAEALDYCNI ENRKIYHDLN AYRILFDEEG DPRLSTFGLM
201: KNSRDGKSYS TNLAYTPPEF LRTGRVIPES VIFSYGTILL DLLSGKHIPP SHALDIIRGK NALLLMDSSL EGQYANDDAT KLVDLASKCL QSEAKDRPDT
301: KFLLSAVAPL QKQEEVASHV LMGLPKNTVI LPTMLSPLGK ACAKMDLATF HDILLKTGYR DEEGAENELS FQEWTQQVQE MLNTKKFGDI AFRDKDFKNS
401: IEYYSKLVGM MPVPSATVFA RRAFSYLMTD QQELALRDAM QAQVCIPEWP TAFYLQALAL SKLGMETDAQ DMLNDGAAYD AKRQNSWRC

Arabidopsis Description

BSK2Serine/threonine-protein kinase BSK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.