Factsheet for TraesCS1D01G194300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G045100.1
TraesCS2B01G057300.1
TraesCS2D01G043700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46570.1	TraesCS2A01G045100.1	AT2G22680.1	21798944
AT5G46570.1	TraesCS2B01G057300.1	AT2G22680.1	21798944
AT5G46570.1	TraesCS2D01G043700.1	AT2G22680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G192300.3	Wheat	cytosol	99.01	99.01
TraesCS1A01G190200.2	Wheat	cytosol	99.6	98.63
Os10t0571300-01	Rice	plasma membrane	96.25	95.12
EER94456	Sorghum	cytosol	93.68	93.86
Zm00001d030021_P001	Maize	cytosol	92.49	92.67
Zm00001d047053_P004	Maize	cytosol	93.08	88.53
HORVU1Hr1G049860.2	Barley	mitochondrion	98.81	86.51
VIT_02s0012g01140.t01	Wine grape	cytosol	83.2	85.05
GSMUA_Achr11P...	Banana	cytosol	82.02	84.35
PGSC0003DMT400004190	Potato	cytosol	81.62	83.94
KRH57593	Soybean	cytosol, endoplasmic reticulum, mitochondrion	81.62	83.27
GSMUA_Achr4P12250_001	Banana	cytosol	81.82	82.8
KRH04312	Soybean	cytosol	80.83	82.13
GSMUA_Achr4P05600_001	Banana	cytosol	79.25	81.67
AT5G46570.1	Thale cress	cytosol	77.08	79.75
CDY33480	Canola	cytosol	76.09	78.73
Bra025014.1-P	Field mustard	cytosol	76.09	78.73
CDX77672	Canola	cytosol	76.09	78.73
CDX78818	Canola	cytosol	75.49	77.02
CDY44497	Canola	cytosol	75.1	76.61
Bra013274.1-P	Field mustard	cytosol	75.1	76.61
CDY01510	Canola	cytosol	56.13	59.54
TraesCS1D01G206900.1	Wheat	plastid	60.47	58.06
TraesCS4D01G325200.1	Wheat	plastid	59.68	57.97
CDY01511	Canola	cytosol	40.32	57.95
TraesCS2D01G597600.1	Wheat	cytosol, mitochondrion	55.53	56.88
CDX90430	Canola	cytosol	40.12	56.55
TraesCS7D01G324900.2	Wheat	cytosol	53.16	55.81
TraesCS5D01G501100.1	Wheat	mitochondrion	51.78	53.47

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011990
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF260	InterPro:Prot_kinase_dom
SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS1D01G194300	EnsemblPlants:TraesCS1D01G194300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:270287809..270292036

Molecular Weight (calculated)

55810.6 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.332

Length

506 amino acids

Sequence
(BLAST)

001: MGCFQSKPAG KPLPPDADAA LPPDDSADPE AANGADGAGA DGDDKDGAKR AVPVFREFGL AELRAATKGF SADLIVSESG EKAPNVVYRG RLDGGRLIAV
101: KRFSRLSWPD PQQFLAEAAG VGKVRHKRLV NLIGCCAEGD ERLLVAEYMP NDTLSKHLFH WDKQPLPWEM RLRVAHYIAQ ALDHCNAENR KIYHDLNAYR
201: VLFDEEGDPR LSSFGLMKNS RDGKSYSTNL AYTPPEFLRT GRVIAESVIY SYGTVLLDLL SGKHIPPSHA LDLIRGKNIL LLMDSSLEGQ YANDDASKLV
301: DLASKCLQFE ARDRPNIKYL LSSVGPLQKQ KEVASHVLMG ITKTASVLPT ILSPLGKACA GMDLTAVHDI LLKTGYKDDE GAENELSFQE WTQQVQEMLN
401: TKKFGDIAFR DKDFKTAIDY YSKLVGMMSV PSATVFARRS FSYLMNGQSE LALRDAMQAQ VCMPEWPTAF YLQALALSKL GMETDAQDML NDGATFEAKK
501: QNSWRG

Best Arabidopsis Sequence Match ( AT5G46570.1 )
(BLAST)

001: MGCLHSKTAN LPSSDDPSAP NKPESVNGDQ VDQEIQNFKE FELNELRKAT NGFSPSCIVS EGGEKAPNVV YRGKLEGNHL VAIKRFSRQS WPDAQQFVVE
101: ATGVGKLRNK RIVSLIGCCA EGDERLLVAE YMPNDTLSKH LFHWEKQPLP WDMRVRIADY IAEALDYCNI ENRKIYHDLN AYRILFDEEG DPRLSTFGLM
201: KNSRDGKSYS TNLAYTPPEF LRTGRVIPES VIFSYGTILL DLLSGKHIPP SHALDIIRGK NALLLMDSSL EGQYANDDAT KLVDLASKCL QSEAKDRPDT
301: KFLLSAVAPL QKQEEVASHV LMGLPKNTVI LPTMLSPLGK ACAKMDLATF HDILLKTGYR DEEGAENELS FQEWTQQVQE MLNTKKFGDI AFRDKDFKNS
401: IEYYSKLVGM MPVPSATVFA RRAFSYLMTD QQELALRDAM QAQVCIPEWP TAFYLQALAL SKLGMETDAQ DMLNDGAAYD AKRQNSWRC

Arabidopsis Description

BSK2Serine/threonine-protein kinase BSK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.