CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU81040

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46570.1	OQU81040	AT2G22680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030021_P001	Maize	cytosol	98.22	98.22
TraesCS1B01G192300.3	Wheat	cytosol	94.26	94.07
TraesCS1D01G194300.1	Wheat	cytosol	93.86	93.68
Os10t0571300-01	Rice	plasma membrane	94.85	93.55
Zm00001d047053_P004	Maize	cytosol	98.42	93.42
TraesCS1A01G190200.2	Wheat	cytosol	94.26	93.15
VIT_02s0012g01140.t01	Wine grape	cytosol	81.58	83.23
GSMUA_Achr11P...	Banana	cytosol	80.0	82.11
KRH57593	Soybean	cytosol, endoplasmic reticulum, mitochondrion	80.59	82.06
PGSC0003DMT400004190	Potato	cytosol	79.8	81.91
HORVU1Hr1G049860.2	Barley	mitochondrion	93.47	81.66
GSMUA_Achr4P12250_001	Banana	cytosol	80.79	81.6
KRH04312	Soybean	cytosol	79.8	80.92
GSMUA_Achr4P05600_001	Banana	cytosol	78.61	80.86
AT5G46570.1	Thale cress	cytosol	75.45	77.91
CDY33480	Canola	cytosol	74.46	76.89
CDX77672	Canola	cytosol	74.46	76.89
Bra025014.1-P	Field mustard	cytosol	74.46	76.89
CDX78818	Canola	cytosol	74.65	76.01
CDY44497	Canola	cytosol	74.46	75.81
Bra013274.1-P	Field mustard	cytosol	74.46	75.81
CDY01510	Canola	cytosol	56.44	59.75
CDY01511	Canola	cytosol	40.79	58.52
EER95565	Sorghum	plastid	59.41	58.14
EER94565	Sorghum	plastid	59.8	57.63
CDX90430	Canola	cytosol	40.4	56.82
EES11678	Sorghum	cytosol	54.85	56.53
OQU90700	Sorghum	plastid	50.89	52.34
OQU78897	Sorghum	cytosol, golgi, plastid	24.55	33.51

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	EntrezGene:8055614
UniProt:C5WRD3	EnsemblPlants:EER94456	ProteinID:EER94456	ProteinID:EER94456.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152
GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF260	InterPro:Prot_kinase_dom	EnsemblPlantsGene:SORBI_3001G290500	SUPFAM:SSF48452
SUPFAM:SSF56112	unigene:Sbi.9946	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0001A82EB6	RefSeq:XP_002467458.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:56750860..56755225

Molecular Weight (calculated)

55870.7 Da

IEP (calculated)

6.608

GRAVY (calculated)

-0.329

Length

505 amino acids

Sequence
(BLAST)

001: MGCFQSKVAG PLPPKDAAAL PADKPADPEA ANGGPDGGGD GDDKEAVKRA VPVFREFALA ELRAATKGFS ADLIVSESGE KAPNAVYRGR LDGGRLIAVK
101: RFSRLSWPDP QQFLAEAAGV GKVRHKRLVN LIGCCAEGDE RLLVAEYMPN DTLSKHLFHW DKQPLPWEMR LRVAYFIAQA LDHCNAENRK IYHDLNAYRV
201: LFDEEGDPRL SSFGLMKNSR DGKSYSTNLA YTPPEFLRTG RVIPESVIYS YGTVLLDLLS GKHIPPSHAL DLIRGKNILL LMDSSLEGQY ANEDASKLVD
301: LASKCLQFES RDRPNIKYLL SSVGPLQKQK EVASHVFMGI TKATSVLPTI YSPLGKACAG MDLSAVHDIL LKTGYKDDEG AENELSFQEW TQQVQEMLNT
401: KKFGDIAFRD KDFKTAIDYY SKLVAMMSTP SATVFARRSF SYLMNGQAEL ALRDAMQAQV CMPEWPTAFY LQALALSKLG METDAQDMLN DGATFEAKKQ
501: NGWRS

Best Arabidopsis Sequence Match ( AT5G46570.1 )
(BLAST)

001: MGCLHSKTAN LPSSDDPSAP NKPESVNGDQ VDQEIQNFKE FELNELRKAT NGFSPSCIVS EGGEKAPNVV YRGKLEGNHL VAIKRFSRQS WPDAQQFVVE
101: ATGVGKLRNK RIVSLIGCCA EGDERLLVAE YMPNDTLSKH LFHWEKQPLP WDMRVRIADY IAEALDYCNI ENRKIYHDLN AYRILFDEEG DPRLSTFGLM
201: KNSRDGKSYS TNLAYTPPEF LRTGRVIPES VIFSYGTILL DLLSGKHIPP SHALDIIRGK NALLLMDSSL EGQYANDDAT KLVDLASKCL QSEAKDRPDT
301: KFLLSAVAPL QKQEEVASHV LMGLPKNTVI LPTMLSPLGK ACAKMDLATF HDILLKTGYR DEEGAENELS FQEWTQQVQE MLNTKKFGDI AFRDKDFKNS
401: IEYYSKLVGM MPVPSATVFA RRAFSYLMTD QQELALRDAM QAQVCIPEWP TAFYLQALAL SKLGMETDAQ DMLNDGAAYD AKRQNSWRC

Arabidopsis Description

BSK2Serine/threonine-protein kinase BSK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.