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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
EES03532
EES12871
OQU86764

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G35230.1 EES03532 AT4G39400.1 18653891
AT4G35230.1 OQU86764 AT4G39400.1 18653891
AT4G35230.1 EES12871 AT5G46330.1 23532072
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027523_P001 Maize plasma membrane 94.57 95.31
Zm00001d048345_P003 Maize plastid 93.22 94.31
GSMUA_Achr11P... Banana cytosol 56.59 85.88
HORVU4Hr1G081600.1 Barley mitochondrion, plastid 85.08 85.24
TraesCS4B01G328200.1 Wheat plastid 84.69 83.56
TraesCS4D01G325200.1 Wheat plastid 84.3 83.49
Os03t0132800-01 Rice plasma membrane 85.85 83.43
TraesCS5A01G500000.1 Wheat plastid 84.5 83.21
GSMUA_Achr5P11610_001 Banana cytosol 78.49 80.68
EER94565 Sorghum plastid 81.2 79.96
GSMUA_Achr4P29650_001 Banana cytosol 76.55 78.69
VIT_03s0038g03270.t01 Wine grape cytosol 75.58 78.0
GSMUA_Achr5P19040_001 Banana plasma membrane 78.29 77.54
CDX69121 Canola cytosol 75.78 77.27
CDX75483 Canola cytosol 75.58 76.47
Bra011596.1-P Field mustard cytosol 75.58 76.17
AT4G35230.1 Thale cress cytosol 75.58 76.17
Bra020806.1-P Field mustard cytosol 74.81 76.13
CDX76321 Canola cytosol 74.81 76.13
CDY17529 Canola cytosol 74.42 75.74
GSMUA_Achr8P13240_001 Banana cytosol, plastid 75.19 75.63
KRH14029 Soybean cytosol 72.09 74.85
KRH74087 Soybean mitochondrion 73.45 74.46
EES11678 Sorghum cytosol 57.17 60.2
EER94456 Sorghum cytosol 58.14 59.41
GSMUA_Achr1P02160_001 Banana cytosol 59.11 56.27
OQU90700 Sorghum plastid 48.45 50.92
Bra034987.1-P Field mustard cytosol 15.5 49.38
OQU78897 Sorghum cytosol, golgi, plastid 30.43 42.43
Protein Annotations
Gene3D:1.10.510.10Gene3D:1.25.40.10MapMan:11.3.2.1.5MapMan:18.4.1.42MapMan:26.8.1.1.4Gene3D:3.30.200.20
EntrezGene:8057418UniProt:C5WZU9ncoils:CoilEnsemblPlants:EER95565ProteinID:EER95565ProteinID:EER95565.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004675GO:GO:0004871
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0007166
GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009605GO:GO:0009607GO:GO:0009719
GO:GO:0009742GO:GO:0009987GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0038023GO:GO:0045087GO:GO:0050832GO:GO:1900459InterPro:IPR000719InterPro:IPR011990
InterPro:Kinase-like_dom_sfPFAM:PF07714PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF41InterPro:Prot_kinase_dom
EnsemblPlantsGene:SORBI_3001G516100SUPFAM:SSF48452SUPFAM:SSF56112unigene:Sbi.9943InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:TPR-like_helical_dom_sf
UniParc:UPI0001A83154RefSeq:XP_002468567.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr1:-:78276486..78280781
Molecular Weight (calculated)
57891.9 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.524
Length
516 amino acids
Sequence
(BLAST)
001: MGCCGSSLRA GRHPEKKPPG RAAGAHPPHR PSYSLNQHQA PTPSAAARAG AGGRQVPLLK EFSLAELRAA TGGFAAENIV SESGEKAPNF VYKGRLEASR
101: RAIAVKKFTK MAWPDPKQFA EEAKGVGKLR HCRLANLIGY CCDGDERLLV AEFMPNDTLA KHLFHWENQT IEWAMRLRVA YYIAEALEYC STEGRPLYHD
201: LNAYRVLFDE NGDPRLSCFG LMKNSRDGKS YSTNLAYTPP EYLRNGRVTS ESVIFSFGTI LLDLLSGKRI PPSRALDMIK GNNIQVLMDS HLEGNYSTDE
301: ATTLVDLASQ CLQYEPRDRP NTKKLVSVLE PLQIKSEVPS YEMLGIPRYE EEASPPPQPQ HPLSPMGEAC SRMDLTAIHQ ILVSTHYRDD EGSNELSFQE
401: WTQQMRDMLE ARKRGDFAFR DKDFKAAIDC YTQFVDVGTM ISPTVYARRS LCHLMCDQPD AALRDAMQAQ CVYPDWPTAF YMQAVALSKL NMQSDATDML
501: NEASQLEEKR QKNTKP
Best Arabidopsis Sequence Match ( AT4G35230.1 )
(BLAST)
001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS
Arabidopsis Description
BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.