CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH42321
KRH53813
KRH58443
KRH64131

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	KRH53813	AT4G39400.1	18653891
AT4G35230.1	KRH64131	AT4G39400.1	18653891
AT4G35230.1	KRH42321	AT5G46330.1	23532072
AT4G35230.1	KRH58443	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74087	Soybean	mitochondrion	96.38	94.11
VIT_03s0038g03270.t01	Wine grape	cytosol	83.3	82.8
GSMUA_Achr11P...	Banana	cytosol	55.94	81.76
CDX69121	Canola	cytosol	81.69	80.24
AT4G35230.1	Thale cress	cytosol	82.5	80.08
CDX75483	Canola	cytosol	81.49	79.41
Bra011596.1-P	Field mustard	cytosol	81.69	79.3
CDY17529	Canola	cytosol	80.89	79.29
Bra020806.1-P	Field mustard	cytosol	80.68	79.09
CDX76321	Canola	cytosol	80.68	79.09
GSMUA_Achr5P11610_001	Banana	cytosol	77.67	76.89
Os10t0542800-01	Rice	cytosol, plasma membrane	15.69	75.73
HORVU1Hr1G052420.3	Barley	cytosol	37.63	73.91
GSMUA_Achr4P29650_001	Banana	cytosol	74.45	73.71
Zm00001d048345_P003	Maize	plastid	75.05	73.14
GSMUA_Achr5P19040_001	Banana	plasma membrane	76.66	73.13
Zm00001d027523_P001	Maize	plasma membrane	75.25	73.05
EER95565	Sorghum	plastid	74.85	72.09
HORVU4Hr1G081600.1	Barley	mitochondrion, plastid	74.45	71.84
TraesCS4B01G328200.1	Wheat	plastid	74.85	71.13
TraesCS1B01G217500.1	Wheat	plastid	75.25	71.1
Os03t0132800-01	Rice	plasma membrane	75.86	71.0
TraesCS1A01G203400.1	Wheat	plastid	74.85	70.99
TraesCS4D01G325200.1	Wheat	plastid	74.25	70.83
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	73.04	70.76
TraesCS5A01G500000.1	Wheat	plastid	74.25	70.42
TraesCS1D01G206900.1	Wheat	plastid	74.65	70.4
EER94565	Sorghum	plastid	73.24	69.47
HORVU0Hr1G000450.1	Barley	plastid	38.23	67.86
HORVU1Hr1G052350.2	Barley	plastid	74.85	65.96
Zm00001d029785_P001	Maize	plastid	72.64	64.81
KRH29720	Soybean	cytosol	38.03	61.97
KRH65064	Soybean	endoplasmic reticulum	60.56	61.3
KRH23152	Soybean	cytosol, endoplasmic reticulum, mitochondrion	59.56	60.66
KRH48161	Soybean	cytosol	59.76	60.49
KRG88787	Soybean	cytosol	59.36	60.08
KRH57593	Soybean	cytosol, endoplasmic reticulum, mitochondrion	59.96	60.08
KRH04312	Soybean	cytosol	59.36	59.24
KRH59867	Soybean	endoplasmic reticulum	57.75	58.69
KRH41166	Soybean	cytosol	57.75	58.69
KRH75770	Soybean	plastid	50.1	57.37
KRH24715	Soybean	endoplasmic reticulum	58.75	56.05
GSMUA_Achr1P02160_001	Banana	cytosol	58.35	53.51
KRH29723	Soybean	cytosol	16.7	52.87
Bra034987.1-P	Field mustard	cytosol	16.3	50.0
KRH10186	Soybean	endoplasmic reticulum, extracellular, plastid	9.86	47.57
OQU78897	Sorghum	cytosol, golgi, plastid	30.18	40.54

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:100781583	MapMan:11.3.2.1.5	MapMan:18.4.1.42	MapMan:26.8.1.1.4
Gene3D:3.30.200.20	EMBL:ACUP02008491	EnsemblPlantsGene:GLYMA_14G002400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009742	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	UniProt:I1M647	InterPro:IPR000719	InterPro:IPR011990	EnsemblPlants:KRH14029	ProteinID:KRH14029
ProteinID:KRH14029.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF41
InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000233B28A	:

Description

hypothetical protein

Coordinates

chr14:+:262666..269931

Molecular Weight (calculated)

56466.0 Da

IEP (calculated)

6.368

GRAVY (calculated)

-0.523

Length

497 amino acids

Sequence
(BLAST)

001: MGCCQSSTLL RVGERETHPE KEKEKDHQRL SEAEKEGFDF SFSEFSLAEL KAATNNFSSD YIVSESGEKA PNLVYKGRLQ NHSRWIAVKK FSKSAWPDPK
101: QFVEEASGVG KLRHPRLAIL IGFCCDGDER LLVAEYMPND TLAKHLFHWE TQTIEWAMRL RVALYIAQAL HYCSSEGRPL YHDLNAYRVL FDQEGDPRLS
201: CFGFMKNSRD GKSYSTNLAY TPPEYLRNGR VTPESVIYSF GTVLLDLLSG KHIPPSQALD MIQGKNNMLL MDSHLEGKFS TEEATVVVNL ASKCLQYEPR
301: ERPDTKDLVT TLAPLHTKPD VRSHIMLGIP KHEEAPSTPQ RPLSAMGEAC SRMDLTAIHQ ILVATHYRDD EGTNELSFQE WTQQMRDMLE ARKRGDHAFR
401: DKDFRTAIDN YSQFIDVGTM VSPTVFARRS LCYLLCDQPD PALRDAMQAQ CVYPDWPTAF YMQSVALAKL DMHKDAADML NEAAALEEKR QRGARGS

Best Arabidopsis Sequence Match ( AT4G35230.1 )
(BLAST)

001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS

Arabidopsis Description

BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.