CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH53813
KRH64131

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00710.1	KRH53813	AT4G39400.1	18653891
AT4G00710.1	KRH64131	AT4G39400.1	18653891

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65064	Soybean	endoplasmic reticulum	96.54	96.54
VIT_15s0046g02900.t01	Wine grape	cytosol	85.34	85.34
CDY07203	Canola	cytosol	79.63	80.79
CDY51145	Canola	cytosol	79.43	80.58
Bra037353.1-P	Field mustard	cytosol	79.23	80.37
AT4G00710.1	Thale cress	cytosol	79.63	79.96
CDX91898	Canola	cytosol	79.02	79.02
CDX74345	Canola	cytosol	78.62	78.62
Bra000962.1-P	Field mustard	cytosol	78.41	78.41
GSMUA_Achr1P15240_001	Banana	cytosol	76.37	76.22
KRH59867	Soybean	endoplasmic reticulum	74.95	75.26
KRH41166	Soybean	cytosol	74.75	75.05
KRG88787	Soybean	cytosol	72.3	72.3
CDX75149	Canola	cytosol, mitochondrion, peroxisome	10.59	72.22
KRH23152	Soybean	cytosol, endoplasmic reticulum, mitochondrion	71.69	72.13
TraesCS2A01G582500.1	Wheat	cytosol, mitochondrion	72.3	71.86
TraesCS2D01G597600.1	Wheat	cytosol, mitochondrion	72.3	71.86
KRH29720	Soybean	cytosol	44.6	71.8
TraesCS2B01G604300.1	Wheat	mitochondrion	72.1	71.66
EES11678	Sorghum	cytosol	71.08	71.22
Zm00001d026653_P004	Maize	plasma membrane	71.08	70.36
AT1G01740.2	Thale cress	cytosol	68.64	69.77
Zm00001d001780_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	71.49	68.42
TraesCS7B01G228900.2	Wheat	cytosol	68.84	67.87
TraesCS7D01G324900.2	Wheat	cytosol	66.6	67.84
KRH75770	Soybean	plastid	59.67	67.51
HORVU7Hr1G078530.3	Barley	cytosol	68.84	67.33
TraesCS7A01G328100.2	Wheat	cytosol	68.23	67.27
KRH24715	Soybean	endoplasmic reticulum	69.65	65.64
CDX90056	Canola	cytosol	64.97	65.37
Bra033237.1-P	Field mustard	cytosol	64.97	65.37
CDY15155	Canola	cytosol	64.15	64.55
HORVU2Hr1G123650.2	Barley	cytosol	71.89	62.15
Os04t0684200-01	Rice	plasma membrane	14.46	61.21
KRH29723	Soybean	cytosol	19.55	61.15
KRH14029	Soybean	cytosol	60.49	59.76
KRH74087	Soybean	mitochondrion	60.69	58.55
KRH57593	Soybean	cytosol, endoplasmic reticulum, mitochondrion	57.84	57.26
CDY64342	Canola	extracellular	7.54	56.92
CDY20930	Canola	extracellular, mitochondrion	7.74	56.72
KRH04312	Soybean	cytosol	56.82	56.02
KRH10186	Soybean	endoplasmic reticulum, extracellular, plastid	10.79	51.46

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:100799260	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20
EMBL:ACUP02004208	EnsemblPlantsGene:GLYMA_07G072100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009742
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
UniProt:I1KIC2	InterPro:IPR000719	InterPro:IPR011990	EnsemblPlants:KRH48161	ProteinID:KRH48161	ProteinID:KRH48161.1
ProteinID:KRH48162.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF147
InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00023381DD

Description

hypothetical protein

Coordinates

chr7:-:6535886..6543302

Molecular Weight (calculated)

55202.8 Da

IEP (calculated)

5.998

GRAVY (calculated)

-0.377

Length

491 amino acids

Sequence
(BLAST)

001: MGIQCSRLIP CCVDSQVKAS VIETPDAEIE DSSEVSNWPT FREYTLEQLK NATSGFAVEN IVSEHGEKAP NVVYKGKLEN QMRIAVKRFN RNAWPDARQF
101: LEEARSVGQL RNQRLANLLG CCCEGEERLL VAEYMPNETL AKHLFHWETQ PMKWAMRLRV VLHLAQALEY CTSKGRALYH DLNAYRVLFD EDGNPRLSSF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVIYSFGT LLLDLLSGKH IPPSHALDVI RGRNLQMLTD SCLEGQFSDD DGTELVRLAS RCLQYEPRER
301: PNPKSLVVAL APLQKETEVP SHVLMGIQHS TTFASLSPLG EACSRKDLTA IQEVLESIGY KDDEGVANEL SFHMWTDQMQ DTLNCKKKGD VAFRQKDFRL
401: AIECYSQFID AGTMVSPTVY ARRSLCYLIS DMPQESLNDA IQAQIVSPVW HIASYLQSVA LTGLGMENEA QAALKEGTTM ESKRNATPKQ K

Best Arabidopsis Sequence Match ( AT4G00710.1 )
(BLAST)

001: MGGQCSSLSC CRNTSHKTAV LEAPDVDNGE SSEITDVPNF REYTLEQLKA ATSGFAVEYI VSEHGEKAPN VVYKGKLENQ KKIAVKRFTR MAWPDSRQFL
101: EEARSVGQLR SERMANLLGC CCEGDERLLV AEFMPNETLA KHLFHWETQP MKWTMRLRVV LYLAQALEYC TSKGRTLYHD LNAYRVLFDE ECNPRLSTFG
201: LMKNSRDGKS YSTNLAFTPP EYLRTGRITP ESVIYSFGTL LLDLLSGKHI PPSHALDLIR DRNLQTLTDS CLDGQFSDSD GTELVRLASR CLQYEARERP
301: NTKSLVTALT PLQKETEVLS HVLMGLPHSG SVSPLSPLGE ACSRRDLTAM LEILEKLGYK DDEGVTNELS FHMWTDQMQE SLNSKKKGDV AFRQKDFREA
401: IECYTQFIDG GMISPTVCAR RSLCYLMSDM PKEALDDAIQ AQVISPVWHV ASYLQSASLG ILGMEKESQI ALKEGSNLEA KMNGVPRVK

Arabidopsis Description

BSK3Serine/threonine-protein kinase BSK3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4L3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.