Factsheet for Zm00001d001780_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

mitochondrion 2
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	mitochondrion, plasma membrane, vacuole
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d011721_P001
Zm00001d014769_P001
Zm00001d043634_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00710.1	Zm00001d011721_P001	AT4G39400.1	18653891
AT4G00710.1	Zm00001d014769_P001	AT4G39400.1	18653891
AT4G00710.1	Zm00001d043634_P001	AT4G39400.1	18653891

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11678	Sorghum	cytosol	92.4	96.73
Zm00001d026653_P004	Maize	plasma membrane	91.81	94.96
TraesCS2B01G604300.1	Wheat	mitochondrion	82.46	85.63
TraesCS2D01G597600.1	Wheat	cytosol, mitochondrion	82.26	85.43
TraesCS2A01G582500.1	Wheat	cytosol, mitochondrion	82.26	85.43
GSMUA_Achr1P15240_001	Banana	cytosol	78.36	81.71
VIT_17s0000g08700.t01	Wine grape	extracellular, plasma membrane	9.36	80.0
Os04t0684200-01	Rice	plasma membrane	17.54	77.59
VIT_15s0046g02900.t01	Wine grape	cytosol	71.93	75.15
Solyc11g064890.1.1	Tomato	cytosol	70.57	74.33
PGSC0003DMT400024464	Potato	cytosol	70.57	74.33
Bra027800.1-P	Field mustard	cytosol	69.79	73.81
HORVU2Hr1G123650.2	Barley	cytosol	81.68	73.77
CDY68942	Canola	plasma membrane	69.79	73.66
CDY64092	Canola	cytosol	69.59	73.61
AT1G63500.1	Thale cress	cytosol	69.79	73.51
VIT_02s0025g03550.t01	Wine grape	cytosol	69.79	73.36
CDY34359	Canola	cytosol	69.4	72.95
CDY25502	Canola	cytosol	69.2	72.75
Bra027646.1-P	Field mustard	cytosol	69.2	72.75
KRH65064	Soybean	endoplasmic reticulum	69.59	72.71
CDY66348	Canola	cytosol	68.23	72.61
CDY65190	Canola	cytosol	44.83	72.56
KRH41166	Soybean	cytosol	68.62	71.98
CDY07203	Canola	cytosol	67.84	71.9
PGSC0003DMT400012025	Potato	cytosol	68.03	71.81
Solyc12g099830.1.1	Tomato	cytosol	67.84	71.6
KRH48161	Soybean	cytosol	68.42	71.49
KRH59867	Soybean	endoplasmic reticulum	68.03	71.37
Bra037353.1-P	Field mustard	cytosol	67.25	71.28
CDX91898	Canola	cytosol	68.03	71.08
CDX74345	Canola	cytosol	68.03	71.08
CDY51145	Canola	cytosol	66.86	70.87
AT4G00710.1	Thale cress	cytosol	67.25	70.55
Bra000962.1-P	Field mustard	cytosol	67.45	70.47
AT5G41260.1	Thale cress	cytosol	66.67	70.23
Bra040944.1-P	Field mustard	mitochondrion	39.96	67.21
AT1G01740.2	Thale cress	cytosol	60.82	64.6
CDX75149	Canola	cytosol, mitochondrion, peroxisome	8.97	63.89
Bra033237.1-P	Field mustard	cytosol	58.87	61.89
CDX90056	Canola	cytosol	58.87	61.89
CDY15155	Canola	cytosol	57.5	60.45
Zm00001d027523_P001	Maize	plasma membrane	56.53	56.64
Zm00001d048345_P003	Maize	plastid	56.14	56.47
Zm00001d034689_P003	Maize	plastid	53.61	56.01
Zm00001d012931_P001	Maize	plasma membrane	53.41	55.8
Zm00001d030021_P001	Maize	cytosol	53.8	54.65
Zm00001d047053_P004	Maize	cytosol	54.19	52.26
Zm00001d029785_P001	Maize	plastid	54.39	50.09
CDY20930	Canola	extracellular, mitochondrion	6.43	49.25
CDY64342	Canola	extracellular	6.24	49.23

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:100278982	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20
UniProt:A0A1D6DSQ4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011990
InterPro:Kinase-like_dom_sf	ProteinID:ONM11931.1	ProteinID:ONM11933.1	ProteinID:ONM11934.1	ProteinID:ONM11936.1	PFAM:PF07714
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF126	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000844A6BE	EnsemblPlantsGene:Zm00001d001780	EnsemblPlants:Zm00001d001780_P002	EnsemblPlants:Zm00001d001780_T002

Description

CASP-like protein 1

Coordinates

chr2:-:709269..717277

Molecular Weight (calculated)

57598.6 Da

IEP (calculated)

5.275

GRAVY (calculated)

-0.321

Length

513 amino acids

Sequence
(BLAST)

001: MGACVSKAAC CCRQPHNGVT NERTDTGLQS FSMEFGVFFL TATLVFLSIV TEDEEAYDLP AFQEFTFEQL RLATSGFAVE NIVSEQGEKA PNVVYKGKLD
101: AQRRIAVKRF NRSAWPDPRQ FLEEARSVGL LRSKRLANLL GCCCEGDERL LVAEYMPNDT LAKHLFHWES QSMKWTMRLR VVLCLAEALE YCTNRGRALY
201: HDLNAYRALF DDDCNPRLSC FGLMKNSRDG KSYSTNLAFT PPEYMRTGRI TPESVIYSFG TLLIDVLSGK HIPPSHALDL IRDRNFNMLL DSCLEGQFSN
301: EEGTEMVRLA SRCLHYEPRE RPNVRSLVQV LTPLQRDVET PSYVLMGIPR GGASSTEPLN LSPLAEACSR KDLTAIHEIL EKTGYKDDEG TANELSFQMW
401: TNQMQDTLNS KKKGDNAFRQ KDFTAAIDCY SQFIEVGTMV SPTIYARRCL SYLMNGMPQE ALNDAMNALV ISPTWSTAFY LQAAALLSQG MENEAQEALK
501: DGCNLEQSSS GGH

Best Arabidopsis Sequence Match ( AT1G63500.1 )
(BLAST)

001: MGCEVSKLCA FCCVSDPEGS NHGVTGLDED RRGEGNDLPQ FREFSIETLR NATSGFATEN IVSEHGEKAP NVVYKGKLDN QRRIAVKRFN RKAWPDSRQF
101: LEEAKAVGQL RNYRMANLLG CCYEGEERLL VAEFMPNETL AKHLFHWESQ PMKWAMRLRV ALHIAQALEY CTGKGRALYH DLNAYRVLFD DDSNPRLSCF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVMYSYGT LLLDLLSGKH IPPSHALDLI RDRNIQMLID SCLEGQFSSD DGTELIRLAS RCLQYEPRER
301: PNPKSLVTAM IPLQKDLETP SHQLMGIPSS ASTTPLSPLG EACLRTDLTA IHEILEKLSY KDDEGAATEL SFQMWTNQMQ DSLNFKKKGD VAFRHKEFAN
401: AIDCYSQFIE GGTMVSPTVY ARRSLCYLMN EMPQEALNDA MQAQVISPAW HIASYLQAVA LSALGQENEA HAALKDGSML ESKRNRL

Arabidopsis Description

BSK7BSK7 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.