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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
 plasma membrane: 26746009
msms PMID: 26746009 doi
S Chen, Y Luo, G Ding, F Xu
National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027800.1-P Field mustard cytosol 99.79 100.0
CDY64092 Canola cytosol 99.38 99.59
CDY25502 Canola cytosol 96.09 95.7
CDY34359 Canola cytosol 96.09 95.7
AT1G63500.1 Thale cress cytosol 95.47 95.28
CDY66348 Canola cytosol 94.24 95.02
CDY65190 Canola cytosol 59.88 91.8
VIT_02s0025g03550.t01 Wine grape cytosol 80.45 80.12
Solyc11g064890.1.1 Tomato cytosol 79.01 78.85
PGSC0003DMT400024464 Potato cytosol 79.01 78.85
CDX75149 Canola cytosol, mitochondrion, peroxisome 11.52 77.78
KRH59867 Soybean endoplasmic reticulum 77.37 76.89
KRH41166 Soybean cytosol 76.95 76.48
PGSC0003DMT400012025 Potato cytosol 75.72 75.72
Solyc12g099830.1.1 Tomato cytosol 75.51 75.51
GSMUA_Achr1P15240_001 Banana cytosol 76.13 75.2
CDY07203 Canola cytosol 74.28 74.59
CDY51145 Canola cytosol 73.25 73.55
EES11678 Sorghum cytosol 73.46 72.86
CDX74345 Canola cytosol 73.25 72.51
CDX91898 Canola cytosol 73.25 72.51
TraesCS2A01G582500.1 Wheat cytosol, mitochondrion 73.05 71.86
TraesCS2D01G597600.1 Wheat cytosol, mitochondrion 73.05 71.86
TraesCS2B01G604300.1 Wheat mitochondrion 72.84 71.66
Zm00001d026653_P004 Maize plasma membrane 72.43 70.97
Zm00001d001780_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 73.66 69.79
CDX76175 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 69.55 68.98
CDY32670 Canola cytosol 69.14 68.71
CDY67218 Canola cytosol 69.34 68.64
CDY33003 Canola cytosol 69.34 68.64
CDY02851 Canola cytosol 68.93 68.51
CDY13169 Canola cytosol 69.14 68.43
TraesCS7D01G324900.2 Wheat cytosol 67.7 68.26
TraesCS7B01G228900.2 Wheat cytosol 69.75 68.07
HORVU7Hr1G078530.3 Barley cytosol 69.75 67.53
TraesCS7A01G328100.2 Wheat cytosol 69.14 67.47
Os04t0684200-01 Rice plasma membrane 15.64 65.52
HORVU2Hr1G123650.2 Barley cytosol 72.63 62.15
CDX90056 Canola cytosol 61.32 61.07
CDY15155 Canola cytosol 60.91 60.66
CDY70900 Canola mitochondrion 38.27 59.81
CDY70772 Canola mitochondrion 38.27 59.81
CDY22182 Canola cytosol 46.3 58.9
CDX69121 Canola cytosol 60.91 58.5
CDY69804 Canola cytosol 55.97 58.49
CDY64342 Canola extracellular 7.82 58.46
CDY20930 Canola extracellular, mitochondrion 8.02 58.21
CDX75483 Canola cytosol 60.91 58.04
CDY33480 Canola cytosol 57.82 57.46
CDX77672 Canola cytosol 57.82 57.46
CDX76321 Canola cytosol 59.88 57.4
CDY10478 Canola mitochondrion 54.94 57.3
CDY17529 Canola cytosol 59.67 57.2
CDX73964 Canola cytosol 57.82 57.0
CDY44497 Canola cytosol 57.82 56.65
CDX78818 Canola cytosol 57.61 56.45
CDY44690 Canola mitochondrion 56.79 56.21
CDY07908 Canola cytosol 57.0 56.19
CDY48109 Canola plastid 24.28 55.92
CDY40323 Canola cytosol 56.17 55.6
CDY12866 Canola nucleus 19.75 55.17
CDY13171 Canola cytosol 10.49 54.84
CDX96069 Canola cytosol, plastid 48.15 48.65
CDY01511 Canola cytosol 35.19 48.58
CDY01839 Canola cytosol, plastid 47.74 48.23
CDX90430 Canola cytosol 34.98 47.35
CDY01510 Canola cytosol 46.3 47.17
CDY07880 Canola cytosol 37.24 46.65
CDY26795 Canola cytosol 44.03 45.92
CDY02219 Canola cytosol 43.62 45.4
CDY03206 Canola extracellular, plasma membrane 7.82 44.71
CDY47487 Canola cytosol 42.8 44.64
CDY66812 Canola cytosol 9.88 41.03
CDX73221 Canola cytosol 7.2 39.77
CDY13173 Canola cytosol 6.58 39.51
Protein Annotations
Gene3D:1.10.510.10Gene3D:1.25.40.10MapMan:11.3.2.1.5MapMan:18.4.1.42Gene3D:3.30.200.20GO:A0A078JU02
UniProt:A0A078JU02EnsemblPlants:CDY68942ProteinID:CDY68942ProteinID:CDY68942.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00081457001InterPro:IPR000719InterPro:IPR011990InterPro:Kinase-like_dom_sfPFAM:PF07714
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF126InterPro:Prot_kinase_domSUPFAM:SSF48452SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:TPR-like_helical_dom_sfUniParc:UPI0004EED218SEG:seg::
Description
BnaAnng28860DBnaAnng28860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JU02]
Coordinates
chrLK038307:+:153..2871
Molecular Weight (calculated)
54305.7 Da
IEP (calculated)
6.447
GRAVY (calculated)
-0.423
Length
486 amino acids
Sequence
(BLAST)
001: MGCEVSKFCC GSEPSGSNHG VTSSGVDDRI GEGNDLPQFR EFSIETLRKA TSGFATENIV SEHGEKAPNV VYKGKLDNQR RIAVKRFNRK AWPDSRQFLE
101: EAKAVGQLRN YRMANLLGCC YEGEERLLVA EFMPNETLAK HLFHWESQPM KWAMRLRVAL HIAQALEYCT AKGRALYHDL NAYRVLFDDD SNPRLSCFGL
201: MKNSRDGKSY STNLAFTPPE YLRTGRVTPE SVMYSYGTLL LDLLSGKHIP PSHALDLIRD RNIQMLMDSC LEGQFSSSDG TELIRLASRC LQDEPRERPN
301: PKSLVTAMIP LQKDLETPSH QLMGIPSSAS TTPLSPLGEA CLRTDLTAIH EILEKLGYKD DEGAATELSF QMWTNQMQDS LNFKKKGDAA FRHKDFANAA
401: ECYSQFIEGG TMVSPTVYAR RSLCYLMNDM PQEALNDAMQ AQVISPAWHI ASYLQAVALS ALGQENEAHA ALKDGSMLES KRNALC
Best Arabidopsis Sequence Match ( AT1G63500.1 )
(BLAST)
001: MGCEVSKLCA FCCVSDPEGS NHGVTGLDED RRGEGNDLPQ FREFSIETLR NATSGFATEN IVSEHGEKAP NVVYKGKLDN QRRIAVKRFN RKAWPDSRQF
101: LEEAKAVGQL RNYRMANLLG CCYEGEERLL VAEFMPNETL AKHLFHWESQ PMKWAMRLRV ALHIAQALEY CTGKGRALYH DLNAYRVLFD DDSNPRLSCF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVMYSYGT LLLDLLSGKH IPPSHALDLI RDRNIQMLID SCLEGQFSSD DGTELIRLAS RCLQYEPRER
301: PNPKSLVTAM IPLQKDLETP SHQLMGIPSS ASTTPLSPLG EACLRTDLTA IHEILEKLSY KDDEGAATEL SFQMWTNQMQ DSLNFKKKGD VAFRHKEFAN
401: AIDCYSQFIE GGTMVSPTVY ARRSLCYLMN EMPQEALNDA MQAQVISPAW HIASYLQAVA LSALGQENEA HAALKDGSML ESKRNRL
Arabidopsis Description
BSK7BSK7 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ26]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.