CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034058.1-P	Field mustard	cytosol	97.91	76.33
AT3G09240.3	Thale cress	cytosol	86.13	66.87
CDY70900	Canola	mitochondrion	52.62	64.63
CDY70772	Canola	mitochondrion	52.62	64.63
CDX75149	Canola	cytosol, mitochondrion, peroxisome	12.04	63.89
CDY69804	Canola	cytosol	77.75	63.87
CDY44690	Canola	mitochondrion	81.68	63.54
CDY07908	Canola	cytosol	81.94	63.49
CDX73964	Canola	cytosol	81.41	63.08
CDY10478	Canola	mitochondrion	67.8	55.58
CDY40323	Canola	cytosol	70.42	54.79
CDY64342	Canola	extracellular	8.64	50.77
CDY20930	Canola	extracellular, mitochondrion	8.9	50.75
CDY13169	Canola	cytosol	60.47	47.05
CDX76175	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	60.21	46.94
CDY68942	Canola	plasma membrane	58.9	46.3
CDY64092	Canola	cytosol	58.64	46.19
CDY48109	Canola	plastid	25.39	45.97
CDY66348	Canola	cytosol	57.85	45.85
CDY01511	Canola	cytosol	42.15	45.74
CDY25502	Canola	cytosol	58.12	45.49
CDY34359	Canola	cytosol	58.12	45.49
CDY07203	Canola	cytosol	57.59	45.45
CDY12866	Canola	nucleus	20.68	45.4
CDX90430	Canola	cytosol	42.41	45.13
CDY51145	Canola	cytosol	57.07	45.04
CDY33003	Canola	cytosol	57.85	45.01
CDY67218	Canola	cytosol	57.59	44.81
CDX91898	Canola	cytosol	57.07	44.4
CDX74345	Canola	cytosol	56.81	44.2
CDY02851	Canola	cytosol	56.28	43.97
CDY32670	Canola	cytosol	56.28	43.97
CDY03206	Canola	extracellular, plasma membrane	9.42	42.35
CDY65190	Canola	cytosol	34.29	41.32
CDY15155	Canola	cytosol	52.36	40.98
CDX90056	Canola	cytosol	52.09	40.78
CDX78818	Canola	cytosol	52.36	40.32
CDX69121	Canola	cytosol	53.14	40.12
CDX76321	Canola	cytosol	52.88	39.84
CDX75483	Canola	cytosol	53.14	39.8
CDY44497	Canola	cytosol	51.57	39.72
CDY33480	Canola	cytosol	50.79	39.67
CDX77672	Canola	cytosol	50.79	39.67
CDY17529	Canola	cytosol	52.62	39.65
CDX96069	Canola	cytosol, plastid	48.69	38.67
CDY01839	Canola	cytosol, plastid	48.69	38.67
CDY01510	Canola	cytosol	42.15	33.75
CDY26795	Canola	cytosol	39.01	31.97
CDY47487	Canola	cytosol	37.43	30.69
CDY02219	Canola	cytosol	37.43	30.62
CDY07880	Canola	cytosol	29.32	28.87
CDY13171	Canola	cytosol	2.09	8.6
CDY13173	Canola	cytosol	0.79	3.7
CDX73221	Canola	cytosol	0.79	3.41
CDY66812	Canola	cytosol	0.79	2.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:A0A078GAV4	UniProt:A0A078GAV4
EnsemblPlants:CDY22182	ProteinID:CDY22182	ProteinID:CDY22182.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00018593001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF201
InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0004EEE1D2	SEG:seg	:

Description

BnaC01g39190DBnaC01g39190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAV4]

Coordinates

chrLK032128:-:408852..410938

Molecular Weight (calculated)

43383.2 Da

IEP (calculated)

7.632

GRAVY (calculated)

-0.345

Length

382 amino acids

Sequence
(BLAST)

001: MGCICFKPFR RSPSPSIKSS IIKQINNNED EDGSSCPSFR EFSLEQLKVA TNGFSANNIV SEHNEKVPNI VYKGSFNDGR MIAVKRFQRL SWPNPSEFIE
101: EAQAVGRCRS EDMANLIGCC SEGHERLLVA EYMPNGTLAK HLFHWEKRPM KWEMRLRVAL HTATALEYCN DRGIDLYHDL NTYRILFDKV GNPRLSCFGL
201: MKCSREGKSY STNLAFAPPE YLRLGTVVPE SVIFSFGTLL LDLMSGRHIP PNHALDLFRG KNYLVLMDSA LDGQFSDEDR TELIHLASRC LRPEPDKRPN
301: IKFLLSALSR LEKRAESWPN VKGENIPAPL YTKPSTKKSL RLSPLAEACW RVDLCSIHEL LEKLGYGEDD VAVTNEVLYI CL

Best Arabidopsis Sequence Match ( AT5G01060.2 )
(BLAST)

001: MGCICFKSWR RSSSSPSITS TVIDDLENVR EYDADDDGGH YPLIFREFSL EQLRIATDGF SAGNIVSEHN DSVPNIVYKG KLGDGRRIAV KRFQRLSWPD
101: PFEFINEAQA VGRLRSEHMA NLIGCCCDDN ERLLVAEYMP NGTLAKHLFH WEKRPMKWEM RLKVALHTAR ALEYCNDKGI DLYHDLNPYR IMFDKTGIPK
201: LSCFGLMKNS HEGKIYSTNL AFAPPEYLRL GTVIAESVTF SFGTLLLDLM SGRHIPPNHA LDLFRGKNYL VLMDSALDGQ FSDEDRTELI HVASRCFKTE
301: PEERPSIKFL KATLSRLQKR AKLCPINVKR PMSVRVTLSI YSRIKNSLS

Arabidopsis Description

Kinase with tetratricopeptide repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LFD0]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.