CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02219	Canola	cytosol	94.07	78.16
CDY66812	Canola	cytosol	22.42	74.36
CDX73221	Canola	cytosol	15.46	68.18
CDY26795	Canola	cytosol	74.48	62.02
CDY47487	Canola	cytosol	72.94	60.73
AT2G17090.1	Thale cress	cytosol	67.78	56.56
CDX75149	Canola	cytosol, mitochondrion, peroxisome	9.28	50.0
CDX69121	Canola	cytosol	59.54	45.65
CDX76321	Canola	cytosol	59.28	45.36
CDY17529	Canola	cytosol	59.28	45.36
CDX75483	Canola	cytosol	59.54	45.29
PGSC0003DMT400025819	Potato	cytosol	56.19	43.78
Solyc04g082260.2.1	Tomato	plastid	55.93	43.57
VIT_18s0001g00180.t01	Wine grape	cytosol	56.7	43.31
CDY65190	Canola	cytosol	35.31	43.22
CDY20930	Canola	extracellular, mitochondrion	6.96	40.3
CDY64342	Canola	extracellular	6.7	40.0
CDY32670	Canola	cytosol	49.48	39.26
CDY02851	Canola	cytosol	49.48	39.26
CDY33003	Canola	cytosol	49.23	38.9
CDY13171	Canola	cytosol	9.28	38.71
CDY67218	Canola	cytosol	48.97	38.7
CDY66348	Canola	cytosol	46.65	37.55
CDY34359	Canola	cytosol	46.91	37.3
CDY25502	Canola	cytosol	46.91	37.3
CDY68942	Canola	plasma membrane	46.65	37.24
CDY51145	Canola	cytosol	46.39	37.19
CDY64092	Canola	cytosol	46.39	37.11
CDY07203	Canola	cytosol	46.13	36.98
CDY13169	Canola	cytosol	46.65	36.86
CDX91898	Canola	cytosol	46.65	36.86
CDX74345	Canola	cytosol	46.65	36.86
CDY01839	Canola	cytosol, plastid	45.62	36.8
CDX96069	Canola	cytosol, plastid	45.36	36.59
CDX76175	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	45.62	36.12
CDY44497	Canola	cytosol	46.13	36.09
CDX78818	Canola	cytosol	46.13	36.09
CDX77672	Canola	cytosol	44.59	35.38
CDY33480	Canola	cytosol	44.59	35.38
CDY70772	Canola	mitochondrion	27.58	34.41
CDY70900	Canola	mitochondrion	27.58	34.41
CDX90056	Canola	cytosol	42.53	33.81
CDY03206	Canola	extracellular, plasma membrane	7.22	32.94
CDY01510	Canola	cytosol	40.46	32.91
CDY69804	Canola	cytosol	39.18	32.69
CDY10478	Canola	mitochondrion	38.4	31.97
CDY15155	Canola	cytosol	40.21	31.97
CDY48109	Canola	plastid	17.27	31.75
CDY44690	Canola	mitochondrion	39.18	30.96
CDX73964	Canola	cytosol	39.18	30.83
CDY07908	Canola	cytosol	38.92	30.63
CDY01511	Canola	cytosol	27.32	30.11
CDY40323	Canola	cytosol	37.63	29.74
CDY13173	Canola	cytosol	6.19	29.63
CDX90430	Canola	cytosol	27.32	29.53
CDY22182	Canola	cytosol	28.87	29.32
CDY12866	Canola	nucleus	10.57	23.56

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:A0A078F0C6
UniProt:A0A078F0C6	EnsemblPlants:CDY07880	ProteinID:CDY07880	ProteinID:CDY07880.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00125055001	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF216	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EECE6B	:	:	:

Description

BnaC03g47420DBnaC03g47420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F0C6]

Coordinates

chrLK031981:+:738786..740824

Molecular Weight (calculated)

44215.9 Da

IEP (calculated)

4.865

GRAVY (calculated)

-0.219

Length

388 amino acids

Sequence
(BLAST)

001: MAWSDPYQFV EEAHRVGKLR HNSVVNLIGY CCDGNERLLV AAFMPNDTLA KRLFHRKIQT MEWEMRLRVA FCVAQALDYC SGGGFTSYNN LSAYSVLFNE
101: DGDACLSCFG LMKEFKDDQR TTGSVNSESL IFRFGTLLVN LLSGKQIPPS HAPEMIHCKS VVELIDPNLK GKFSAEEATI IFKLASQCLQ YEDIESLNTK
201: DLVTTFETLH TKTNVKASSY VLPEMAKRKD VSLNQLSTLG DACLKLDLKA IHKILVMAED DKELVELSFE EWLEEVKDIQ EVRKRGDQAF LEQDFETAID
301: CYSQLIEFRR MVYPSVYARR CLCYLFCNQP DRALKDGMVA QQLFPDWPTA FYLQSVALSK LNMITDSADT LKEATLLEAT RQHQEEES

Best Arabidopsis Sequence Match ( AT2G17090.1 )
(BLAST)

001: MGCCYSLSST VDPVQDHTTD ASSEPRNGGG EDPPLTKFSF SALKTATNHF SPENIVSDQT SDVVFKGRLQ NGGFVAIKRF NNMAWSDPKL FLEEAQRVGK
101: LRHKRLVNLI GYCCDGDKRF LVADFMANDT LAKRLFQRKY QTMDWSIRLR VAYFVAEALD YCNTAGFASY NNLSAYKVLF DEDGDACLSC FGLMKEINND
201: QITTGSVNPE NVIYRFGTVL VNLLSGKQIP PSHAPEMIHR KNVFKLMDPY LKGKFSIDEA NVVYKLASQC LKYEGQESPN TKEIVATLET LQTRTEAPSY
301: EVVEMTNQEK DASSSSNLSP LGEACLRMDL ASIHSILVLA GYDDDKDIIE LSFEEWIQEV KELQDVRRNG DRAFVEQDFK TAIACYSQFV EERSLVYPSV
401: YARRSLSYLF CDEPEKALLD GMHAQGVFPD WPTAFYLQSV ALAKLDMNTD SADTLKEAAL LEVKK

Arabidopsis Description

BSK12Probable inactive receptor-like kinase SSP [Source:UniProtKB/Swiss-Prot;Acc:Q7XJT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.