Factsheet for PGSC0003DMT400025819

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g082260.2.1	Tomato	plastid	99.2	99.2
VIT_18s0001g00180.t01	Wine grape	cytosol	88.55	86.81
PGSC0003DMT400052467	Potato	mitochondrion	64.46	65.38
PGSC0003DMT400004190	Potato	cytosol	62.05	62.8
PGSC0003DMT400028622	Potato	cytosol, mitochondrion, plastid	60.64	61.51
AT1G50990.1	Thale cress	cytosol	60.84	59.76
CDX96069	Canola	cytosol, plastid	57.43	59.46
CDY01839	Canola	cytosol, plastid	57.43	59.46
Bra004246.1-P	Field mustard	cytosol, plastid	57.23	59.25
PGSC0003DMT400024464	Potato	cytosol	57.83	59.14
PGSC0003DMT400012025	Potato	cytosol	57.43	58.85
CDY26795	Canola	cytosol	52.81	56.44
CDY07880	Canola	cytosol	43.78	56.19
Bra037282.1-P	Field mustard	cytosol	52.01	55.58
CDY47487	Canola	cytosol	51.81	55.36
PGSC0003DMT400078011	Potato	cytosol	58.84	54.46
Bra013030.1-P	Field mustard	nucleus	50.8	54.41
CDY02219	Canola	cytosol	50.8	54.18
CDY66812	Canola	cytosol	12.45	52.99
AT2G17090.1	Thale cress	cytosol	49.4	52.9
CDX73221	Canola	cytosol	9.04	51.14

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:102591184	MapMan:11.3.2.1.5	MapMan:18.4.1.42	MapMan:26.8.1.1.4
Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011990
InterPro:Kinase-like_dom_sf	UniProt:M1AM44	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400009972	PGSC:PGSC0003DMG400009972	EnsemblPlants:PGSC0003DMT400025819
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000294D609	RefSeq:XP_006342111.1	SEG:seg	:

Description

Receptor protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400009972]

Coordinates

chr4:-:71488917..71495290

Molecular Weight (calculated)

55651.1 Da

IEP (calculated)

6.070

GRAVY (calculated)

-0.421

Length

498 amino acids

Sequence
(BLAST)

001: MGCCQSSILK ELSSEKDQRH GVVNARPSNG TGAGAAVGDG GVPVFSEFSL SELKAATNNF SSEFIVSESG EKAPNMVYKG RLQNRRWIAV KKFTKSAWPD
101: PKQFADEASG VGNLRHKRLA NLIGYCSDGD ERLLVAEYMP NDTLAKHLFH WENQTLEWAM RLRVALYIAE ALDYCSSEGR PLYHDLNAYR VLFDESGDPR
201: LSCFGLMKNS RDGKSYSTNL AYTPPEYLRN GRVTQESVVF SYGTVLLDLL SGKHIPPGHA LDMIRGKNIL LLMDSHLEGN FSTEEATVVF DLASRCLQYE
301: PRERPNTKDL VSTLGPLQSK PDVSSHVMLG IPKSEEAPPT PQHPLSAMGD ACSRMDLTAI HQILVMTHYK DDEGTNELSF QEWTQQMRDM LEARKRGDLA
401: FRDKDFKTAI DCYSQFVDVG TMVSPTVYAR RSLCYLMCDQ PDAALRDAMQ AQCVYPDWST AFYMQAVALS KLDMHKDAAD MLNEAAILEE KRRGGRAS

Best Arabidopsis Sequence Match ( AT4G35230.1 )
(BLAST)

001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS

Arabidopsis Description

BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.