Factsheet for PGSC0003DMT400028622

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g085000.1.1	Tomato	cytosol	98.98	98.98
PGSC0003DMT400052467	Potato	mitochondrion	85.74	85.74
VIT_08s0007g01520.t01	Wine grape	mitochondrion, plastid	80.45	80.45
KRG88787	Soybean	cytosol	77.19	77.19
AT3G54030.1	Thale cress	plastid	73.73	73.88
KRH75770	Soybean	plastid	64.77	73.27
CDY13169	Canola	cytosol	72.71	72.71
Bra014847.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	72.3	72.45
CDX76175	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	72.1	72.24
PGSC0003DMT400024464	Potato	cytosol	70.26	70.84
PGSC0003DMT400012025	Potato	cytosol	69.04	69.75
PGSC0003DMT400078011	Potato	cytosol	69.25	63.2
PGSC0003DMT400025819	Potato	cytosol	61.51	60.64
CDY13171	Canola	cytosol	11.41	60.22
PGSC0003DMT400004190	Potato	cytosol	56.21	56.1
AT2G17170.1	Thale cress	cytosol	27.7	41.46

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:102585985	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf
UniProt:M1ARE4	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400011015	PGSC:PGSC0003DMG400011015	EnsemblPlants:PGSC0003DMT400028622	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF201	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002956165	RefSeq:XP_006339002.1	:	:	:

Description

Receptor protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400011015]

Coordinates

chr10:-:54089408..54094848

Molecular Weight (calculated)

54933.4 Da

IEP (calculated)

6.105

GRAVY (calculated)

-0.341

Length

491 amino acids

Sequence
(BLAST)

001: MGGRSSKFSF CCWHSSRKPS PHDLSDLENG GENGKNALPD FTEFSLDVLM IATEGFSADN IVSEHGEKAP NVVFKGLLEN GHWVAVKRFN KSAWPDSRQF
101: LDEAKAVGNL RSERLANLLG CCCEGEQRLL VAEFMPNETL AKHLFHWDSQ PMKWAMRLRV AFYLAQAVEY CSSKGRAIYH DLNAYRILFD QDGNPRLSCF
201: GLMKNSRDGK SYSTNLAFTP PEYMRTGRVT SESVVYSFGT MLLDLLSGKH IPPSHALDLI RVKNLSMLMD SCLEGDFSND DGTELVRLAT RCLQYEARER
301: PNAKSLVNSL IAIQKETEVP SHVLLGIRHG AATPPQPLVL TTMGEACLRR DLTALHEILQ KTGYKDDEGI ANELSFQMWT NQMQETLNSK QQGDAAFRAK
401: DFITAIECYT QFNDGGTMVS PTIYARRCLC YLMSDMAQEA LGDAMQAQVI SSEWPTAFYL QSVALFTLGM ENDAQEALKE ATKLEGKRSK N

Best Arabidopsis Sequence Match ( AT5G59010.1 )
(BLAST)

001: MGPRCSKLSL CWWPTHLKST HNEASDLDNG TDDLPSFTEF SFDQLRAATC GFSTDSIVSE HGVKAPNVVY KGRLEDDRWI AVKRFNRSAW PDTRQFLEEA
101: KAVGQLRNER LANLIGFCCE GDERLLVAEF MPFETLSKHL FHWDSQPMKW SMRLRVALYL AQALEYCSSK GRALYHDLNA YRILFDQDGN PRLSCFGLMK
201: NSRDGKSYST NLAFTPPEYL RTGRVIPESV VYSFGTLLLD LLSGKHIPPS HALDLIRGKN FLMLMDSCLD GHFSNDDGTD LVRLASRCLQ YEARERPNVK
301: SLVSSLAPLQ KETDIPSHVL MGIPHGAASP KETTSLTPLG DACSRHDLTA IHEILEKVGY KDDEGVANEL SFQVWTDQIQ ETLNSKKQGD AAFKGKDFVT
401: AVECYTQFIE DGTMVSPTVF ARRCLCYLMS NMPQEALGDA MQAQVVSPEW PTAFYLQAAA LFSLGMDKDA CETLKDGTSL EAKKHNNRN

Arabidopsis Description

BSK5Serine/threonine-protein kinase BSK5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIL1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.