Factsheet for PGSC0003DMT400078011

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g076600.1.1	Tomato	cytosol	88.66	94.83
PGSC0003DMT400052467	Potato	mitochondrion	66.17	72.51
PGSC0003DMT400028622	Potato	cytosol, mitochondrion, plastid	63.2	69.25
GSMUA_Achr8P02400_001	Banana	plastid	61.9	67.82
GSMUA_Achr10P...	Banana	mitochondrion, plastid	61.71	66.94
PGSC0003DMT400024464	Potato	cytosol	58.74	64.89
PGSC0003DMT400012025	Potato	cytosol	57.43	63.58
Os03t0825300-03	Rice	plastid	54.65	60.25
OQU90700	Sorghum	plastid	53.9	59.06
PGSC0003DMT400025819	Potato	cytosol	54.46	58.84
Zm00001d034689_P003	Maize	plastid	53.53	58.66
Zm00001d012931_P001	Maize	plasma membrane	52.6	57.64
TraesCS5D01G501100.1	Wheat	mitochondrion	51.49	56.53
PGSC0003DMT400004190	Potato	cytosol	51.67	56.5
TraesCS5B01G500800.1	Wheat	mitochondrion	51.3	56.33
TraesCS5A01G487000.2	Wheat	mitochondrion	51.3	53.38
HORVU5Hr1G114850.10	Barley	mitochondrion	50.19	52.22

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	UniProt:M1CZ85	PFAM:PF07714
EnsemblPlantsGene:PGSC0003DMG400030343	PGSC:PGSC0003DMG400030343	EnsemblPlants:PGSC0003DMT400078011	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF18
InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00029627F4
SEG:seg	:	:	:	:	:

Description

Receptor protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400030343]

Coordinates

chr6:+:56921828..56926250

Molecular Weight (calculated)

60687.2 Da

IEP (calculated)

7.263

GRAVY (calculated)

-0.375

Length

538 amino acids

Sequence
(BLAST)

001: MGGRCSNLCF CLWPSNIKSH ALYSSDIEKW AENEQLNLPV FKEYGLEELK AATSNFSANN IVSEHGEKAP NVVFKGRLNG NGRWIAIKRF QSSAWPDSGQ
101: FLDEAKTVGQ LRSKRLANLL GCCCEGDERL LVAEFMHHET LSKHLFHWDN RPLEWSMRLR VALYLTQALD YCSSKGRELY HDLNSYRVLF DQDCEPRLSC
201: FGLMKNSRDG KSYSTNLAFT PPEYLKTGKV TPESVVYSFG ALLLDLLSGK HIPPSHFLLY FTSIKAPSSP KCNSSFRGVF SERAKRLTEN IVGNVNRRIF
301: ELQALDLIRG KNFLMLIDSC LEGHFSNDDG TELVQLASRC LQYEPHDRPN VKSLLTSITP LQKEKDVPSN VLMSIAHETT SPTQLSLTPL GEACSTCDLT
401: AIHEILEKAG YKEDEGIANE LSFQMWANQL QETLNTRKSG DSAFRDKDFT TAIKCYTQFL EGGNVKSPTV LARRSLCYLM SKKPQEALAD AMQAQVQFSN
501: WPTAFYLQAA ALFTLGMDSD ARETLKDGSS LDFRRMRQ

Best Arabidopsis Sequence Match ( AT3G54030.1 )
(BLAST)

001: MGARCSKFSF CLFPSHFKSA SVLESPDIEN GGKVWPTFKE FKLEQLKSAT GGFSSDNIVS EHGEKAPNVV YRGRLDDGRL IAVKRFNRLA WADHRQFLDE
101: AKAVGSLRSD RLANLIGCCF EGEERLLVAE FMPHETLAKH LFHWENNPMK WAMRLRVALC LAQALEYCSN KGRALYHDLN AYRVLFDKDG NPRLSCFGLM
201: KNSRDGKSYS TNLAFTPPEY LRTGRVTPES VVFSFGTVLL DLMSGKHIPP SHALDLIRGK NCAMLMDSAL EGHFSNEDGT ELVRLATRCL QYEARERPNV
301: KSLVTSLVTL QKESDVASYV LMGIPHETEA EEESPLSLTP FGDACLRVDL TAIQEILSKI GYKDDEGIAN ELSFQMWTNQ MQESLNSKKQ GDLAFRSKDF
401: TTAVDCYTQF IDGGTMVSPT VHARRCLSYL MNDNAQEALT DALQAQVVSP DWPTALYLQA ACLFKLGMEA DAQQALKDGT TLEAKKSNKR

Arabidopsis Description

BSK6BSK6 [Source:UniProtKB/TrEMBL;Acc:A0A178VAE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.