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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, nucleus
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13173 Canola cytosol 43.01 49.38
CDX73221 Canola cytosol 26.88 28.41
CDY66812 Canola cytosol 26.88 21.37
CDY13169 Canola cytosol 86.02 16.29
CDX76175 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 81.72 15.51
CDY70772 Canola mitochondrion 50.54 15.11
CDY70900 Canola mitochondrion 50.54 15.11
CDY48109 Canola plastid 32.26 14.22
CDY65190 Canola cytosol 48.39 14.2
KRH75770 Soybean plastid 65.59 14.06
KRG88787 Soybean cytosol 68.82 13.03
VIT_08s0007g01520.t01 Wine grape mitochondrion, plastid 66.67 12.63
CDY32670 Canola cytosol 65.59 12.47
CDY02851 Canola cytosol 65.59 12.47
CDY33003 Canola cytosol 64.52 12.22
PGSC0003DMT400052467 Potato mitochondrion 63.44 12.02
Solyc09g011750.2.1 Tomato mitochondrion 63.44 12.02
CDY67218 Canola cytosol 63.44 12.02
PGSC0003DMT400028622 Potato cytosol, mitochondrion, plastid 60.22 11.41
Solyc10g085000.1.1 Tomato cytosol 60.22 11.41
GSMUA_Achr8P02400_001 Banana plastid 59.14 11.2
GSMUA_Achr10P... Banana mitochondrion, plastid 58.06 10.89
CDY69804 Canola cytosol 53.76 10.75
CDY10478 Canola mitochondrion 53.76 10.73
CDY44690 Canola mitochondrion 55.91 10.59
CDY66348 Canola cytosol 54.84 10.58
CDY64092 Canola cytosol 54.84 10.52
CDY68942 Canola plasma membrane 54.84 10.49
CDX91898 Canola cytosol 54.84 10.39
CDX74345 Canola cytosol 54.84 10.39
CDY07203 Canola cytosol 53.76 10.33
CDY25502 Canola cytosol 53.76 10.25
CDY34359 Canola cytosol 53.76 10.25
CDY40323 Canola cytosol 53.76 10.18
CDY07908 Canola cytosol 53.76 10.14
CDX73964 Canola cytosol 53.76 10.14
CDY51145 Canola cytosol 50.54 9.71
CDY15155 Canola cytosol 49.46 9.43
CDX90056 Canola cytosol 49.46 9.43
CDY07880 Canola cytosol 38.71 9.28
CDX78818 Canola cytosol 48.39 9.07
CDY44497 Canola cytosol 48.39 9.07
CDY33480 Canola cytosol 47.31 9.0
CDX77672 Canola cytosol 47.31 9.0
CDX69121 Canola cytosol 48.39 8.89
CDX75483 Canola cytosol 48.39 8.82
CDX96069 Canola cytosol, plastid 45.16 8.73
CDY01839 Canola cytosol, plastid 45.16 8.73
CDX76321 Canola cytosol 47.31 8.68
CDY17529 Canola cytosol 47.31 8.68
CDY47487 Canola cytosol 43.01 8.58
CDY26795 Canola cytosol 41.94 8.37
TraesCS5D01G501100.1 Wheat mitochondrion 44.09 8.37
TraesCS5B01G500800.1 Wheat mitochondrion 44.09 8.37
Zm00001d012931_P001 Maize plasma membrane 44.09 8.35
Os03t0825300-03 Rice plastid 43.01 8.2
OQU90700 Sorghum plastid 43.01 8.15
CDY01510 Canola cytosol 40.86 7.97
Zm00001d034689_P003 Maize plastid 41.94 7.94
CDY02219 Canola cytosol 39.78 7.92
HORVU5Hr1G114850.10 Barley mitochondrion 43.01 7.74
TraesCS5A01G487000.2 Wheat mitochondrion 43.01 7.74
CDX75149 Canola cytosol, mitochondrion, peroxisome 4.3 5.56
CDY64342 Canola extracellular 2.15 3.08
CDY20930 Canola extracellular, mitochondrion 2.15 2.99
AT2G17170.1 Thale cress cytosol 7.53 2.13
CDY22182 Canola cytosol 8.6 2.09
CDY12866 Canola nucleus 3.23 1.72
CDY03206 Canola extracellular, plasma membrane 1.08 1.18
CDY01511 Canola cytosol 4.3 1.14
CDX90430 Canola cytosol 4.3 1.11
Protein Annotations
EnsemblPlants:CDY13171EnsemblPlantsGene:GSBRNA2T00071037001Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR011990InterPro:TPR-like_helical_dom_sfPANTHER:PTHR27001PANTHER:PTHR27001:SF201ProteinID:CDY13171ProteinID:CDY13171.1
SUPFAM:SSF48452UniParc:UPI0004EDF99EUniProt:A0A078FJ23MapMan:35.1::
Description
BnaC04g26640DBnaC04g26640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJ23]
Coordinates
chrLK032032:+:158874..159155
Molecular Weight (calculated)
10436.5 Da
IEP (calculated)
4.690
GRAVY (calculated)
-0.157
Length
93 amino acids
Sequence
(BLAST)
1: MAGLYCVYFI DGGTMVSRTV DSRRCLTYLM NENAEEALTD ALQAQVVSPE WPTALYLQVY LQAACLFKLG METDAQQAFK DGTTLEAKKT NRR
Best Arabidopsis Sequence Match ( AT3G54030.1 )
(BLAST)
001: MGARCSKFSF CLFPSHFKSA SVLESPDIEN GGKVWPTFKE FKLEQLKSAT GGFSSDNIVS EHGEKAPNVV YRGRLDDGRL IAVKRFNRLA WADHRQFLDE
101: AKAVGSLRSD RLANLIGCCF EGEERLLVAE FMPHETLAKH LFHWENNPMK WAMRLRVALC LAQALEYCSN KGRALYHDLN AYRVLFDKDG NPRLSCFGLM
201: KNSRDGKSYS TNLAFTPPEY LRTGRVTPES VVFSFGTVLL DLMSGKHIPP SHALDLIRGK NCAMLMDSAL EGHFSNEDGT ELVRLATRCL QYEARERPNV
301: KSLVTSLVTL QKESDVASYV LMGIPHETEA EEESPLSLTP FGDACLRVDL TAIQEILSKI GYKDDEGIAN ELSFQMWTNQ MQESLNSKKQ GDLAFRSKDF
401: TTAVDCYTQF IDGGTMVSPT VHARRCLSYL MNDNAQEALT DALQAQVVSP DWPTALYLQA ACLFKLGMEA DAQQALKDGT TLEAKKSNKR
Arabidopsis Description
BSK6BSK6 [Source:UniProtKB/TrEMBL;Acc:A0A178VAE8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.