CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009624.1-P	Field mustard	cytosol	99.39	99.39
CDY10478	Canola	mitochondrion	92.67	97.64
AT5G01060.1	Thale cress	cytosol	83.5	82.16
CDY48109	Canola	plastid	33.81	78.67
CDY70900	Canola	mitochondrion	48.47	76.53
CDY70772	Canola	mitochondrion	48.47	76.53
CDX73964	Canola	cytosol	72.3	72.01
CDY69804	Canola	cytosol	67.62	71.4
CDY07908	Canola	cytosol	71.49	71.2
CDY44690	Canola	mitochondrion	70.88	70.88
CDY22182	Canola	cytosol	54.79	70.42
CDX76175	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	57.03	57.14
CDY65190	Canola	cytosol	36.86	57.1
CDY13169	Canola	cytosol	57.03	57.03
CDY67218	Canola	cytosol	56.82	56.82
CDY33003	Canola	cytosol	56.21	56.21
CDY68942	Canola	plasma membrane	55.6	56.17
CDY64092	Canola	cytosol	55.4	56.08
CDY66348	Canola	cytosol	54.58	55.6
CDX75149	Canola	cytosol, mitochondrion, peroxisome	8.15	55.56
CDY34359	Canola	cytosol	55.19	55.53
CDY02851	Canola	cytosol	55.19	55.42
CDY32670	Canola	cytosol	55.19	55.42
CDY25502	Canola	cytosol	54.99	55.33
CDY07203	Canola	cytosol	53.36	54.13
CDY13171	Canola	cytosol	10.18	53.76
CDY51145	Canola	cytosol	52.95	53.72
CDX91898	Canola	cytosol	53.16	53.16
CDX74345	Canola	cytosol	53.16	53.16
CDY15155	Canola	cytosol	49.29	49.59
CDX78818	Canola	cytosol	49.49	48.99
CDX90056	Canola	cytosol	48.47	48.77
CDY44497	Canola	cytosol	48.88	48.39
CDY33480	Canola	cytosol	47.05	47.24
CDX77672	Canola	cytosol	47.05	47.24
CDX69121	Canola	cytosol	48.27	46.84
CDX76321	Canola	cytosol	48.07	46.55
CDX75483	Canola	cytosol	48.27	46.47
CDY17529	Canola	cytosol	47.86	46.35
CDY20930	Canola	extracellular, mitochondrion	6.11	44.78
CDY01839	Canola	cytosol, plastid	43.79	44.7
CDY64342	Canola	extracellular	5.91	44.62
CDX96069	Canola	cytosol, plastid	43.38	44.28
CDY12866	Canola	nucleus	14.87	41.95
CDY01511	Canola	cytosol	29.74	41.48
CDY13173	Canola	cytosol	6.72	40.74
CDX90430	Canola	cytosol	29.74	40.67
CDY01510	Canola	cytosol	39.31	40.46
CDY26795	Canola	cytosol	37.47	39.48
CDY47487	Canola	cytosol	36.86	38.84
CDY02219	Canola	cytosol	36.66	38.54
CDY03206	Canola	extracellular, plasma membrane	6.52	37.65
CDY07880	Canola	cytosol	29.74	37.63
CDX73221	Canola	cytosol	6.31	35.23
CDY66812	Canola	cytosol	8.15	34.19

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:A0A078HU77
UniProt:A0A078HU77	EnsemblPlants:CDY40323	ProteinID:CDY40323	ProteinID:CDY40323.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00069505001	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF201	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EF3625	SEG:seg	:	:	:

Description

BnaA10g27450DBnaA10g27450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HU77]

Coordinates

chrLK032468:-:113494..115867

Molecular Weight (calculated)

55813.4 Da

IEP (calculated)

5.477

GRAVY (calculated)

-0.399

Length

491 amino acids

Sequence
(BLAST)

001: MGCICFKSLQ LKPPPSITST VVDSQDDDDG DDGQYPLIFR EFSFEQLRIA TDGFSPGNIV SEHDEWVPNT VYKGKLGDGR RIAVKRFQRL SWPDPFEFIK
101: EAEAVGRLRS EHIANLIGYC SDDSERLLVA EFMPNSTLSN HLFHWEKRPM KWQTRLKVAL HTAKALEYCN DNGINLYHDL NPYRILFDKV GNPKLSCFGL
201: MKNSHEGKNH STNLAFAPPE YLRLGTLIPE SVTYSFGTLL LDLMSGRHIP PNHALDLFQT KNYLVLVDSA LDGQFSDEDR TELVHIASRC LKTEPEERPS
301: IRFLMSTLSR LQRRAELWPT NVKRLMPSSS NKKTKPATEP LKLTPFGDAC LRADLCTMHE LLEKLGYGAD DDVVSNEFSF QMWTGEMQEN MDHKNHGDAA
401: FRAKDYDTGI EFYTEFMYGA PTVSPTVLAR RCLCYLMTEM FSEALSDAMQ AQVASPEWPI PLYLQAACLF KLDMEAEAKE ALRHGSALES Y

Best Arabidopsis Sequence Match ( AT5G01060.1 )
(BLAST)

001: MGCICFKSWR RSSSSPSITS TVIDDLENVR EYDADDDGGH YPLIFREFSL EQLRIATDGF SAGNIVSEHN DSVPNIVYKG KLGDGRRIAV KRFQRLSWPD
101: PFEFINEAQA VGRLRSEHMA NLIGCCCDDN ERLLVAEYMP NGTLAKHLFH WEKRPMKWEM RLKVALHTAR ALEYCNDKGI DLYHDLNPYR IMFDKTGIPK
201: LSCFGLMKNS HEGKIYSTNL AFAPPEYLRL GTVIAESVTF SFGTLLLDLM SGRHIPPNHA LDLFRGKNYL VLMDSALDGQ FSDEDRTELI HVASRCFKTE
301: PEERPSIKFL KATLSRLQKR AKLCPINVKR PMSPPSKNLP EKTKPATESL KLTPFGDACS RADLSSIHEL LEKLGYEEDN GVGNEFSFQM WTGEMQENMD
401: YKKHGDAAFL AKDFDTAIEF YTEFMTGAPT VSPTVLARRC LCYLMTEMFS EALSDAMQAQ VASPEWPIPL YLQAACLFKL EMEAEAKEAL RHGSALEAY

Arabidopsis Description

Kinase with tetratricopeptide repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LFD0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.