Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX72702
CDX90332
CDY12143
CDY41977
CDY53185
CDY66903
CDY66904

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G00710.1 CDX72702 AT4G39400.1 18653891
AT4G00710.1 CDX90332 AT4G39400.1 18653891
AT4G00710.1 CDY12143 AT4G39400.1 18653891
AT4G00710.1 CDY41977 AT4G39400.1 18653891
AT4G00710.1 CDY53185 AT4G39400.1 18653891
AT4G00710.1 CDY66903 AT4G39400.1 18653891
AT4G00710.1 CDY66904 AT4G39400.1 18653891
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037353.1-P Field mustard cytosol 99.59 99.59
CDY07203 Canola cytosol 98.55 98.55
CDX91898 Canola cytosol 95.04 93.69
CDX74345 Canola cytosol 94.83 93.48
AT4G00710.1 Thale cress cytosol 92.98 92.02
CDY12866 Canola nucleus 31.61 87.93
VIT_15s0046g02900.t01 Wine grape cytosol 80.79 79.63
KRH48161 Soybean cytosol 80.58 79.43
KRH65064 Soybean endoplasmic reticulum 79.75 78.62
CDY66348 Canola cytosol 73.55 73.86
CDY65190 Canola cytosol 48.14 73.5
CDY68942 Canola plasma membrane 73.55 73.25
CDY64092 Canola cytosol 73.35 73.2
CDY34359 Canola cytosol 73.76 73.16
GSMUA_Achr1P15240_001 Banana cytosol 74.17 72.97
CDY25502 Canola cytosol 73.55 72.95
CDX90056 Canola cytosol 71.69 71.11
CDY15155 Canola cytosol 70.87 70.29
CDX75149 Canola cytosol, mitochondrion, peroxisome 10.33 69.44
EES11678 Sorghum cytosol 70.25 69.39
TraesCS2D01G597600.1 Wheat cytosol, mitochondrion 70.45 69.03
TraesCS2A01G582500.1 Wheat cytosol, mitochondrion 70.45 69.03
TraesCS2B01G604300.1 Wheat mitochondrion 70.25 68.83
CDY33003 Canola cytosol 69.63 68.64
Zm00001d026653_P004 Maize plasma membrane 70.25 68.55
CDY67218 Canola cytosol 69.42 68.43
CDY32670 Canola cytosol 67.98 67.28
CDY02851 Canola cytosol 67.77 67.08
CDX76175 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 67.77 66.94
Zm00001d001780_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 70.87 66.86
CDY13169 Canola cytosol 67.56 66.6
TraesCS7B01G228900.2 Wheat cytosol 67.56 65.66
TraesCS7D01G324900.2 Wheat cytosol 65.29 65.56
HORVU7Hr1G078530.3 Barley cytosol 67.77 65.34
TraesCS7A01G328100.2 Wheat cytosol 66.94 65.06
HORVU2Hr1G123650.2 Barley cytosol 70.04 59.68
CDY70772 Canola mitochondrion 37.6 58.52
CDY70900 Canola mitochondrion 37.6 58.52
CDY69804 Canola cytosol 55.58 57.85
Os04t0684200-01 Rice plasma membrane 13.84 57.76
CDY22182 Canola cytosol 45.04 57.07
CDY33480 Canola cytosol 57.64 57.06
CDX77672 Canola cytosol 57.64 57.06
CDX69121 Canola cytosol 59.5 56.92
CDX75483 Canola cytosol 59.5 56.47
CDY44497 Canola cytosol 57.44 56.05
CDX76321 Canola cytosol 58.47 55.82
CDY17529 Canola cytosol 58.26 55.62
CDX73964 Canola cytosol 56.61 55.58
CDX78818 Canola cytosol 56.82 55.44
CDY44690 Canola mitochondrion 56.2 55.4
CDY07908 Canola cytosol 55.58 54.56
CDY10478 Canola mitochondrion 52.48 54.51
CDY48109 Canola plastid 23.76 54.5
CDY40323 Canola cytosol 53.72 52.95
CDY64342 Canola extracellular 7.02 52.31
CDY20930 Canola extracellular, mitochondrion 7.23 52.24
CDY13171 Canola cytosol 9.71 50.54
CDY01511 Canola cytosol 36.36 50.0
CDX90430 Canola cytosol 36.16 48.75
CDX96069 Canola cytosol, plastid 47.73 48.02
CDY01839 Canola cytosol, plastid 47.31 47.61
CDY01510 Canola cytosol 46.28 46.96
CDY07880 Canola cytosol 37.19 46.39
CDY03206 Canola extracellular, plasma membrane 8.06 45.88
CDY26795 Canola cytosol 42.98 44.64
CDY02219 Canola cytosol 42.56 44.11
CDY47487 Canola cytosol 41.74 43.35
CDY66812 Canola cytosol 9.3 38.46
CDX73221 Canola cytosol 6.82 37.5
CDY13173 Canola cytosol 5.99 35.8
Protein Annotations
Gene3D:1.10.510.10Gene3D:1.25.40.10MapMan:11.3.2.1.5MapMan:18.4.1.42Gene3D:3.30.200.20GO:A0A078IJA2
UniProt:A0A078IJA2EnsemblPlants:CDY51145ProteinID:CDY51145ProteinID:CDY51145.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00098331001InterPro:IPR000719InterPro:IPR011990InterPro:Kinase-like_dom_sfPFAM:PF07714
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF126InterPro:Prot_kinase_domSUPFAM:SSF48452SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:TPR-like_helical_dom_sfUniParc:UPI0004EF18C9SEG:seg::
Description
BnaA09g51800DBnaA09g51800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJA2]
Coordinates
chrLK032970:-:23210..26133
Molecular Weight (calculated)
54708.2 Da
IEP (calculated)
5.812
GRAVY (calculated)
-0.427
Length
484 amino acids
Sequence
(BLAST)
001: MGGQCSNLGC CRKPSHKTAV LEAPPHLENG DNSDVTDVPA FREYTLDQLK SATSGFAVEY IVSEHGEKAP NVVYRGKLEN QKKIAVKRFT RMAWPDARQF
101: LEEARSVGQL RSERMANLLG CCCEGDERLL VAEFMPNETL AKHLFHWETQ PMKWTMRLRV VLYLAQALEY CTNQERTLYH DLNAYRVLFD EECNPRLSTF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRIT PESVIYSFGT LLLDLLSGKH IPPSHALDLI RDRNLQTLTD SCLDGQFSDS DGTELVRLAS RCLQYEARER
301: PNPKSLVTAL TPLQKDTEVP SHVLMGLPHS SSVSPLSPLG EACSRKDLTA MLEILEKLGY KDDEGVTNEL SFHMWTDQMQ ESLNFKKKGD VAFRQKDFRE
401: AIECYTQFID GGMISPTVCA RRSLCYLMSD MPKEALDDAI QAQLISPLWH VASYLQSASL SFLEMENESQ IALKEGSNLE SKRN
Best Arabidopsis Sequence Match ( AT4G00710.1 )
(BLAST)
001: MGGQCSSLSC CRNTSHKTAV LEAPDVDNGE SSEITDVPNF REYTLEQLKA ATSGFAVEYI VSEHGEKAPN VVYKGKLENQ KKIAVKRFTR MAWPDSRQFL
101: EEARSVGQLR SERMANLLGC CCEGDERLLV AEFMPNETLA KHLFHWETQP MKWTMRLRVV LYLAQALEYC TSKGRTLYHD LNAYRVLFDE ECNPRLSTFG
201: LMKNSRDGKS YSTNLAFTPP EYLRTGRITP ESVIYSFGTL LLDLLSGKHI PPSHALDLIR DRNLQTLTDS CLDGQFSDSD GTELVRLASR CLQYEARERP
301: NTKSLVTALT PLQKETEVLS HVLMGLPHSG SVSPLSPLGE ACSRRDLTAM LEILEKLGYK DDEGVTNELS FHMWTDQMQE SLNSKKKGDV AFRQKDFREA
401: IECYTQFIDG GMISPTVCAR RSLCYLMSDM PKEALDDAIQ AQVISPVWHV ASYLQSASLG ILGMEKESQI ALKEGSNLEA KMNGVPRVK
Arabidopsis Description
BSK3Serine/threonine-protein kinase BSK3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4L3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.