Factsheet for GSMUA_Achr1P15240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P05250_001
GSMUA_Achr4P08920_001
GSMUA_Achr6P35950_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00710.1	GSMUA_Achr1P05250_001	AT4G39400.1	18653891
AT4G00710.1	GSMUA_Achr4P08920_001	AT4G39400.1	18653891
AT4G00710.1	GSMUA_Achr6P35950_001	AT4G39400.1	18653891
AT4G00710.1	GSMUA_AchrUn_...	AT4G39400.1	18653891

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g08700.t01	Wine grape	extracellular, plasma membrane	10.37	85.0
VIT_15s0046g02900.t01	Wine grape	cytosol	81.3	81.47
EES11678	Sorghum	cytosol	81.1	81.43
TraesCS2A01G582500.1	Wheat	cytosol, mitochondrion	81.5	81.17
TraesCS2D01G597600.1	Wheat	cytosol, mitochondrion	81.5	81.17
TraesCS2B01G604300.1	Wheat	mitochondrion	81.3	80.97
Zm00001d026653_P004	Maize	plasma membrane	81.3	80.65
VIT_02s0025g03550.t01	Wine grape	cytosol	79.47	80.12
Solyc11g064890.1.1	Tomato	cytosol	78.46	79.26
PGSC0003DMT400024464	Potato	cytosol	78.46	79.26
TraesCS7D01G324900.2	Wheat	cytosol	76.83	78.42
Zm00001d001780_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	81.71	78.36
TraesCS7B01G228900.2	Wheat	cytosol	78.86	77.91
KRH65064	Soybean	endoplasmic reticulum	77.24	77.39
HORVU7Hr1G078530.3	Barley	cytosol	78.86	77.29
TraesCS7A01G328100.2	Wheat	cytosol	77.85	76.91
Os04t0684200-01	Rice	plasma membrane	18.09	76.72
KRH48161	Soybean	cytosol	76.22	76.37
Solyc12g099830.1.1	Tomato	cytosol	75.41	76.34
Bra027800.1-P	Field mustard	cytosol	75.2	76.29
CDY68942	Canola	plasma membrane	75.2	76.13
CDY64092	Canola	cytosol	75.0	76.08
AT1G63500.1	Thale cress	cytosol	75.0	75.77
CDY66348	Canola	cytosol	74.19	75.73
CDY25502	Canola	cytosol	75.0	75.61
CDY34359	Canola	cytosol	75.0	75.61
PGSC0003DMT400012025	Potato	cytosol	74.59	75.51
CDY07203	Canola	cytosol	74.19	75.41
Bra027646.1-P	Field mustard	cytosol	74.8	75.41
CDY65190	Canola	cytosol	48.58	75.39
AT4G00710.1	Thale cress	cytosol	74.8	75.26
KRH41166	Soybean	cytosol	74.59	75.05
CDX74345	Canola	cytosol	74.8	74.95
CDX91898	Canola	cytosol	74.59	74.75
KRH59867	Soybean	endoplasmic reticulum	74.19	74.64
Bra037353.1-P	Field mustard	cytosol	73.37	74.59
Bra000962.1-P	Field mustard	cytosol	74.39	74.54
AT5G41260.1	Thale cress	cytosol	73.58	74.33
CDY51145	Canola	cytosol	72.97	74.17
CDX75149	Canola	cytosol, mitochondrion, peroxisome	10.77	73.61
Bra040944.1-P	Field mustard	mitochondrion	44.11	71.15
HORVU2Hr1G123650.2	Barley	cytosol	80.89	70.07
GSMUA_Achr8P02400_001	Banana	plastid	69.72	69.86
AT1G01740.2	Thale cress	cytosol	67.48	68.74
GSMUA_Achr10P...	Banana	mitochondrion, plastid	68.5	67.94
GSMUA_Achr11P...	Banana	cytosol	44.51	64.41
CDY15155	Canola	cytosol	63.21	63.73
CDX90056	Canola	cytosol	63.21	63.73
Bra033237.1-P	Field mustard	cytosol	63.21	63.73
GSMUA_Achr5P11610_001	Banana	cytosol	60.98	59.76
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	61.38	58.87
GSMUA_Achr5P19040_001	Banana	plasma membrane	62.2	58.73
GSMUA_Achr4P29650_001	Banana	cytosol	59.35	58.17
GSMUA_Achr11P...	Banana	cytosol	57.72	57.72
GSMUA_Achr4P05600_001	Banana	cytosol	57.52	57.64
GSMUA_Achr4P12250_001	Banana	cytosol	58.13	57.2
CDY64342	Canola	extracellular	7.32	55.38
CDY20930	Canola	extracellular, mitochondrion	7.52	55.22
GSMUA_Achr1P02160_001	Banana	cytosol	48.78	44.28

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G15240_001	EnsemblPlants:GSMUA_Achr1P15240_001	EnsemblPlants:GSMUA_Achr1T15240_001	InterPro:IPR000719
InterPro:IPR011990	InterPro:Kinase-like_dom_sf	UniProt:M0S032	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF126	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf
UniParc:UPI000295AE59	SEG:seg	:	:	:	:

Description

Probable serine/threonine-protein kinase At5g41260 [Source:GMGC_GENE;Acc:GSMUA_Achr1G15240_001]

Coordinates

chr1:+:11472860..11481166

Molecular Weight (calculated)

55685.3 Da

IEP (calculated)

5.545

GRAVY (calculated)

-0.386

Length

492 amino acids

Sequence
(BLAST)

001: MGSRVSKLWP CCWRSQFKGT VLEAPDAESE EKGEAYDLPS FQEFSFEQLR LATSGFAVEN IVSEHGEKAP NVVYKGKLDA QRRIAVKRFN RSAWPDPRQF
101: LEEARAVGQL RNHRLANLLG CCYEGEERLL VAEYMPNETL AKHLFHWESQ PMKWPMRLRV VLYLAEALEY CTSKGRALYH DLNAYRVLFD EDCNPRLSCF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVIYSFGT LLLDVLSGKH IPPSHALDLI RDRNFNMLTD SCLEGQFSNE DGTELVRLAS RCLQYEQRER
301: PNVKSIVLAL TPLQRETEVP SYVLMDIPRG GASSIESLSL SPLGEACSRM DLTAIHEILE TVGYKDDEGT TNELSFQMWT NQMQETLNSK KKGDTAFRHK
401: DFNTAIECYT QFIDVGTMVS PTIFARRCLS YLMNDLPQQA LNDAVQALVI SPTWPTALYL QAAGLLALGM ENEAREALKD GSLLEAKKNE GH

Best Arabidopsis Sequence Match ( AT1G63500.1 )
(BLAST)

001: MGCEVSKLCA FCCVSDPEGS NHGVTGLDED RRGEGNDLPQ FREFSIETLR NATSGFATEN IVSEHGEKAP NVVYKGKLDN QRRIAVKRFN RKAWPDSRQF
101: LEEAKAVGQL RNYRMANLLG CCYEGEERLL VAEFMPNETL AKHLFHWESQ PMKWAMRLRV ALHIAQALEY CTGKGRALYH DLNAYRVLFD DDSNPRLSCF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVMYSYGT LLLDLLSGKH IPPSHALDLI RDRNIQMLID SCLEGQFSSD DGTELIRLAS RCLQYEPRER
301: PNPKSLVTAM IPLQKDLETP SHQLMGIPSS ASTTPLSPLG EACLRTDLTA IHEILEKLSY KDDEGAATEL SFQMWTNQMQ DSLNFKKKGD VAFRHKEFAN
401: AIDCYSQFIE GGTMVSPTVY ARRSLCYLMN EMPQEALNDA MQAQVISPAW HIASYLQAVA LSALGQENEA HAALKDGSML ESKRNRL

Arabidopsis Description

BSK7BSK7 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.