Factsheet for GSMUA_Achr5P19040_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P05250_001
GSMUA_Achr4P08920_001
GSMUA_Achr6P19930_001
GSMUA_Achr6P35950_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	GSMUA_Achr1P05250_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr4P08920_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr6P35950_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_AchrUn_...	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr6P19930_001	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	60.65	92.94
GSMUA_Achr5P11610_001	Banana	cytosol	82.92	86.06
Os10t0542800-01	Rice	cytosol, plasma membrane	16.7	84.47
GSMUA_Achr4P29650_001	Banana	cytosol	81.19	84.26
VIT_03s0038g03270.t01	Wine grape	cytosol	76.97	80.2
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	78.89	80.12
Zm00001d048345_P003	Maize	plastid	77.35	79.02
CDX69121	Canola	cytosol	76.58	78.85
Zm00001d027523_P001	Maize	plasma membrane	76.97	78.32
Bra011596.1-P	Field mustard	cytosol	76.97	78.32
EER95565	Sorghum	plastid	77.54	78.29
HORVU1Hr1G052420.3	Barley	cytosol	38.0	78.26
CDX75483	Canola	cytosol	76.58	78.24
AT4G35230.1	Thale cress	cytosol	76.78	78.12
CDX76321	Canola	cytosol	76.01	78.11
Bra020806.1-P	Field mustard	cytosol	76.01	78.11
CDY17529	Canola	cytosol	75.62	77.71
HORVU4Hr1G081600.1	Barley	mitochondrion, plastid	76.78	77.67
Os03t0132800-01	Rice	plasma membrane	78.31	76.84
TraesCS4B01G328200.1	Wheat	plastid	76.97	76.67
KRH14029	Soybean	cytosol	73.13	76.66
TraesCS4D01G325200.1	Wheat	plastid	76.58	76.58
TraesCS5A01G500000.1	Wheat	plastid	76.58	76.14
TraesCS1A01G203400.1	Wheat	plastid	76.39	75.95
TraesCS1B01G217500.1	Wheat	plastid	76.39	75.67
TraesCS1D01G206900.1	Wheat	plastid	76.39	75.52
KRH74087	Soybean	mitochondrion	73.7	75.44
EER94565	Sorghum	plastid	75.05	74.62
HORVU0Hr1G000450.1	Barley	plastid	38.96	72.5
HORVU1Hr1G052350.2	Barley	plastid	76.2	70.39
Zm00001d029785_P001	Maize	plastid	73.51	68.76
GSMUA_Achr1P15240_001	Banana	cytosol	58.73	62.2
GSMUA_Achr11P...	Banana	cytosol	56.05	59.35
GSMUA_Achr8P02400_001	Banana	plastid	55.28	58.66
GSMUA_Achr1P02160_001	Banana	cytosol	60.84	58.49
GSMUA_Achr4P12250_001	Banana	cytosol	56.05	58.4
GSMUA_Achr4P05600_001	Banana	cytosol	54.51	57.84
GSMUA_Achr10P...	Banana	mitochondrion, plastid	54.89	57.66
Bra034987.1-P	Field mustard	cytosol	16.31	52.47
OQU78897	Sorghum	cytosol, golgi, plastid	28.21	39.73

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	MapMan:26.8.1.1.4	Gene3D:3.30.200.20
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G19040_001	EnsemblPlants:GSMUA_Achr5P19040_001	EnsemblPlants:GSMUA_Achr5T19040_001
InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	UniProt:M0SZT3	PFAM:PF07714	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI000295FF63	SEG:seg	:	:	:

Description

Probable serine/threonine-protein kinase At4g35230 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19040_001]

Coordinates

chr5:+:20550451..20559398

Molecular Weight (calculated)

58604.7 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.441

Length

521 amino acids

Sequence
(BLAST)

001: MGSCCSSLLP GDHQPATAPA AAEQQNNHLH SNHQKQQRRS FSVEAGEGGG GGEVTAFAEF SLAELKAATN GFSAENIVSE SGDKAPNLVY KGRLQNRRWI
101: AVKKFTRTAW PDPKQFAEEA WGVGKLRHRR LANLIGYCCE GDERLLVAEY MPNDTLAKHL FHWENQSIGW AMRLRVSFCI AEALEYCSNE GHPLYHDLNA
201: YRVLFDEDGD PRLSCFGLMK NSRDGKSYST NLAYTPPEYL RNGRVTPESV IFSFGTVLLD LLSGKRIPPT HLIYFIMNLK WALDMIRGKN ILVLMDSHLE
301: GNFSTEEATT LVDLASQCLQ YEPRDRPNTK KLVAALAPLQ TKSETPSYVM LGIQKHEEAP ATPQHPLSPM GEACSRMDLT AIHQILVMTH YKDDEGTNEL
401: SFQEWTQQMR DILEARRRGD FAFRDKDFKT AIECYSQFID VGTMVSPTVY ARRSLCHLMC DHHDAALRDA MQAQCVYPDW PTAFYMQAAA LAKLNMQSDA
501: VDMLQEASML EEKRQKGGKG S

Best Arabidopsis Sequence Match ( AT4G35230.1 )
(BLAST)

001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS

Arabidopsis Description

BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.