Factsheet for TraesCS1A01G203400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G461800.1
TraesCS2A01G461900.1
TraesCS2B01G483400.1
TraesCS2B01G483500.1
TraesCS2D01G462000.1
TraesCS2D01G462100.1
TraesCS3A01G245000.1
TraesCS3A01G490100.1
TraesCS3B01G275000.1
TraesCS3B01G550900.1
TraesCS3B01G551200.1
TraesCS3D01G246500.1
TraesCS3D01G496100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	TraesCS3A01G245000.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3A01G490100.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3B01G275000.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3B01G550900.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3B01G551200.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3D01G246500.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS3D01G496100.1	AT4G39400.1	18653891
AT4G35230.1	TraesCS2A01G461800.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2A01G461900.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2B01G483400.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2B01G483500.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2D01G462000.1	AT5G46330.1	23532072
AT4G35230.1	TraesCS2D01G462100.1	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G206900.1	Wheat	plastid	98.47	97.91
TraesCS1B01G217500.1	Wheat	plastid	98.09	97.72
HORVU0Hr1G000450.1	Barley	plastid	50.57	94.64
Os10t0542800-01	Rice	cytosol, plasma membrane	18.32	93.2
HORVU1Hr1G052350.2	Barley	plastid	96.76	89.89
GSMUA_Achr11P...	Banana	cytosol	55.53	85.59
TraesCS5A01G500000.1	Wheat	plastid	82.25	82.25
GSMUA_Achr5P11610_001	Banana	cytosol	76.72	80.08
Zm00001d029785_P001	Maize	plastid	83.59	78.64
GSMUA_Achr4P29650_001	Banana	cytosol	74.62	77.89
VIT_03s0038g03270.t01	Wine grape	cytosol	74.05	77.6
GSMUA_Achr5P19040_001	Banana	plasma membrane	75.95	76.39
CDX69121	Canola	cytosol	73.28	75.89
CDX75483	Canola	cytosol	73.47	75.49
CDX76321	Canola	cytosol	72.71	75.15
Bra020806.1-P	Field mustard	cytosol	72.71	75.15
Bra011596.1-P	Field mustard	cytosol	73.28	75.0
KRH14029	Soybean	cytosol	70.99	74.85
AT4G35230.1	Thale cress	cytosol	73.09	74.8
CDY17529	Canola	cytosol	72.33	74.75
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	73.09	74.66
KRH74087	Soybean	mitochondrion	71.56	73.67
TraesCS1A01G190200.2	Wheat	cytosol	58.4	59.88
TraesCS2A01G582500.1	Wheat	cytosol, mitochondrion	55.73	59.11
TraesCS7A01G328100.2	Wheat	cytosol	54.39	57.23
GSMUA_Achr1P02160_001	Banana	cytosol	57.44	55.54
TraesCS5A01G487000.2	Wheat	mitochondrion	48.28	48.94
Bra034987.1-P	Field mustard	cytosol	13.93	45.06
OQU78897	Sorghum	cytosol, golgi, plastid	30.15	42.7

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	MapMan:26.8.1.1.4	Gene3D:3.30.200.20
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011990
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom
SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS1A01G203400	EnsemblPlants:TraesCS1A01G203400.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:365065025..365071118

Molecular Weight (calculated)

58574.6 Da

IEP (calculated)

6.695

GRAVY (calculated)

-0.510

Length

524 amino acids

Sequence
(BLAST)

001: MGCCGSSLRS WVHAEKPPAP RRPAPSSPPP HRPSFTLKAQ KAAPPPPTAA RGEEEQEVPA LAEFSLAELR AATDGFAAGN IVSESGEKAP NLVYRGRLRG
101: AAPRAIAVKK FAKHAWPDPK QFAEEAKGVG KLRHRRLANL IGYCCDGDER LLVAEFMSND TLAKHLFHWE NQTIEWAMRL RVAYYIAEAL GYCSNEERSL
201: YHDLNAYRVL FDENGDPRLS CFGLMKNSRD GKSYSTNLAY TPPEYLRNGR VTAESVIFSF GTVLLDLLSG KRIPPSHALD MIRSRNIQAL MDSHLEGNYS
301: TEEATTLVNL ASQCLQYEPR DRPDIKKLVS ILEPLQTKSE VPSYVMLGVP KPDEPSKAPP SPTPQPQHPL SPMGEACSRM DLTAIHQILV SMHYRDDEGS
401: NELSFQEWTQ QMRDMLDARK QGDFAFRDKD FKAAIDCYTQ FVDVGTMVSP TVYARRSLCH LMCDQPDAAL RDAMQAQCVY PDWPTAFYMQ AVALSKLDMQ
501: SDATDMLNEA SQLEEKRQKS ARGP

Best Arabidopsis Sequence Match ( AT4G35230.1 )
(BLAST)

001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS

Arabidopsis Description

BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.