Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0718300-01 | |
| Os04t0618700-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G35230.1 | Os01t0718300-01 | AT4G39400.1 | 18653891 |
| AT4G35230.1 | Os04t0618700-01 | AT5G46330.1 | 23532072 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G052420.3 | Barley | cytosol | 93.2 | 37.94 |
| GSMUA_Achr11P... | Banana | cytosol | 85.44 | 25.88 |
| TraesCS1A01G203400.1 | Wheat | plastid | 93.2 | 18.32 |
| TraesCS1B01G217500.1 | Wheat | plastid | 93.2 | 18.25 |
| TraesCS1D01G206900.1 | Wheat | plastid | 93.2 | 18.22 |
| OQU78897 | Sorghum | cytosol, golgi, plastid | 65.05 | 18.11 |
| GSMUA_Achr4P29650_001 | Banana | cytosol | 86.41 | 17.73 |
| GSMUA_Achr5P11610_001 | Banana | cytosol | 85.44 | 17.53 |
| Os03t0132800-01 | Rice | plasma membrane | 89.32 | 17.33 |
| HORVU1Hr1G052350.2 | Barley | plastid | 93.2 | 17.02 |
| VIT_03s0038g03270.t01 | Wine grape | cytosol | 82.52 | 17.0 |
| GSMUA_Achr5P19040_001 | Banana | plasma membrane | 84.47 | 16.7 |
| CDX76321 | Canola | cytosol | 80.58 | 16.37 |
| Bra020806.1-P | Field mustard | cytosol | 80.58 | 16.37 |
| CDY17529 | Canola | cytosol | 79.61 | 16.17 |
| Zm00001d029785_P001 | Maize | plastid | 87.38 | 16.16 |
| CDX69121 | Canola | cytosol | 78.64 | 16.01 |
| GSMUA_Achr8P13240_001 | Banana | cytosol, plastid | 79.61 | 15.98 |
| CDX75483 | Canola | cytosol | 78.64 | 15.88 |
| Bra011596.1-P | Field mustard | cytosol | 78.64 | 15.82 |
| KRH14029 | Soybean | cytosol | 75.73 | 15.69 |
| AT4G35230.1 | Thale cress | cytosol | 77.67 | 15.62 |
| KRH74087 | Soybean | mitochondrion | 74.76 | 15.13 |
| Os10t0571300-01 | Rice | plasma membrane | 54.37 | 10.94 |
| Os03t0825300-03 | Rice | plastid | 36.89 | 7.79 |
| GSMUA_Achr1P02160_001 | Banana | cytosol | 37.86 | 7.2 |
| Os04t0684200-01 | Rice | plasma membrane | 0.0 | 0.0 |
| HORVU0Hr1G000450.1 | Barley | plastid | 0.0 | 0.0 |
| Bra034987.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os10t0542800-01 | EnsemblPlantsGene:Os10g0542800 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF41 | SUPFAM:SSF48452 | UniParc:UPI0000DD9A60 |
| MapMan:35.1 | : | : | : | : | : |
Description
RECEPTOR-LIKE CYTOPLASMIC KINASE 304Similar to ATP binding protein. (Os10t0542800-01)
Coordinates
chr10:+:21203869..21204669
Molecular Weight (calculated)
11692.9 Da
IEP (calculated)
5.033
GRAVY (calculated)
-0.393
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: GDFAFRDKNF KQAIDCYTQF VDVGTMVSPT VYARRSLCHL MCDQPDAALR DAMQAQCVYP DWPTAFYMQA VALSKLNMQS DSLDMLNEAS QLEEKRQKSI
101: KGP
101: KGP
001: MGCCQSSFLK PSSLHDKKIT SDDLSGRRGK GAKRGNRHRH ANINEGRGWH FSDVPDFSEF SASVLRDATN NFNKNAVVSV CSDQEPNLVY QGCIRSDKDK
101: RLIAVKKFSK TTWPDPKQFA TEARAIGSLR HVRLVNLIGY CCEGDERLLV SEYMPNESLT KHLFHWEKQT MEWAMRLRVA LYVAEALEYC RQSGLKLYHD
201: LNTCRVLFDE NGSPRLSCFG WMKNSKDGKN FSTNLAYTPP EYLRSGTLIP ESVVFSFGTF LLDLLSGKHI PPSHAVGTIQ KQNLNVLMDS HLEGNYPEED
301: AAMVFDLASK CLHNNPNERP EIGDIISVIT TLQQKLDVPS YTMLGISKLE KLEMEHPKSL IYDACHQMDL AALHQILEAM EYKEDEVTCE LSFQQWAQQI
401: KDVCNTRQQG DSAFRNKHFE SAIDKYTQFI EIGIMISPTV YARRSMCYLF CDQPDAALRD AMQAQCVYSD WPTAFYLQAV ALSKLNMVED SATMLKEALI
501: LEDKRGS
101: RLIAVKKFSK TTWPDPKQFA TEARAIGSLR HVRLVNLIGY CCEGDERLLV SEYMPNESLT KHLFHWEKQT MEWAMRLRVA LYVAEALEYC RQSGLKLYHD
201: LNTCRVLFDE NGSPRLSCFG WMKNSKDGKN FSTNLAYTPP EYLRSGTLIP ESVVFSFGTF LLDLLSGKHI PPSHAVGTIQ KQNLNVLMDS HLEGNYPEED
301: AAMVFDLASK CLHNNPNERP EIGDIISVIT TLQQKLDVPS YTMLGISKLE KLEMEHPKSL IYDACHQMDL AALHQILEAM EYKEDEVTCE LSFQQWAQQI
401: KDVCNTRQQG DSAFRNKHFE SAIDKYTQFI EIGIMISPTV YARRSMCYLF CDQPDAALRD AMQAQCVYSD WPTAFYLQAV ALSKLNMVED SATMLKEALI
501: LEDKRGS
Arabidopsis Description
BSK11Serine/threonine-protein kinase BSK11 [Source:UniProtKB/Swiss-Prot;Acc:F4I7Y4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.