Factsheet for HORVU1Hr1G052420.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G104030.4
HORVU3Hr1G068000.2
HORVU3Hr1G068010.1
HORVU3Hr1G068020.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	HORVU3Hr1G068000.2	AT4G39400.1	18653891
AT4G35230.1	HORVU3Hr1G068010.1	AT4G39400.1	18653891
AT4G35230.1	HORVU3Hr1G068020.2	AT4G39400.1	18653891
AT4G35230.1	HORVU2Hr1G104030.4	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0542800-01	Rice	cytosol, plasma membrane	37.94	93.2
GSMUA_Achr11P...	Banana	cytosol	77.87	57.94
HORVU1Hr1G052350.2	Barley	plastid	98.42	44.15
HORVU4Hr1G081600.1	Barley	mitochondrion, plastid	83.79	41.16
GSMUA_Achr5P11610_001	Banana	cytosol	78.26	39.44
VIT_03s0038g03270.t01	Wine grape	cytosol	77.47	39.2
GSMUA_Achr4P29650_001	Banana	cytosol	77.47	39.04
Zm00001d029785_P001	Maize	plastid	84.58	38.42
GSMUA_Achr5P19040_001	Banana	plasma membrane	78.26	38.0
KRH14029	Soybean	cytosol	73.91	37.63
CDX69121	Canola	cytosol	74.7	37.35
CDX75483	Canola	cytosol	75.1	37.25
Bra011596.1-P	Field mustard	cytosol	74.7	36.91
AT4G35230.1	Thale cress	cytosol	74.7	36.91
CDX76321	Canola	cytosol	73.52	36.69
Bra020806.1-P	Field mustard	cytosol	73.52	36.69
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	74.31	36.65
CDY17529	Canola	cytosol	73.12	36.49
KRH74087	Soybean	mitochondrion	73.12	36.35
OQU78897	Sorghum	cytosol, golgi, plastid	46.64	31.89
HORVU7Hr1G078530.3	Barley	cytosol	50.99	25.7
GSMUA_Achr1P02160_001	Banana	cytosol	51.78	24.17
HORVU1Hr1G049860.2	Barley	mitochondrion	53.75	23.53
HORVU2Hr1G123650.2	Barley	cytosol	50.99	22.71
HORVU5Hr1G114850.10	Barley	mitochondrion	38.34	18.76
Bra034987.1-P	Field mustard	cytosol	1.19	1.85
HORVU0Hr1G000450.1	Barley	plastid	1.19	1.07

Protein Annotations

EnsemblPlants:HORVU1Hr1G052420.3	EnsemblPlantsGene:HORVU1Hr1G052420	Gene3D:1.10.510.10	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR27001
PANTHER:PTHR27001:SF41	SEG:seg	SUPFAM:SSF48452	SUPFAM:SSF56112	UniParc:UPI000B465F7B	UniProt:A0A287FKT2
MapMan:11.3.2.1.5	MapMan:18.4.1.42	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:388540772..388544850

Molecular Weight (calculated)

28493.9 Da

IEP (calculated)

4.684

GRAVY (calculated)

-0.497

Length

253 amino acids

Sequence
(BLAST)

001: VQLAPQALDM IRSRNIQALM DSHLEGNYST EEATTLVNLA SQCLQYEPRD RPDIKKLVSI LEPLQTKSEV PSYVMLGVAK PDELSKAPPS PPPQPQHPLS
101: AMGEACSRMD LTAIHQILVS MHYRDDEGSN ELSFQEWTQQ MRDMLDARKQ GDFAFRDKDF KAAIDCYTQF VDVGTMVSPT VYARRSLCHL MCDQPDAALR
201: DAMQAQCVYP DWPTAFYMQA VALSKLDMQS DATDMLNEAS QLEEKRQKSA RGP

Best Arabidopsis Sequence Match ( AT1G50990.1 )
(BLAST)

001: MGCCQSSFLK PSSLHDKKIT SDDLSGRRGK GAKRGNRHRH ANINEGRGWH FSDVPDFSEF SASVLRDATN NFNKNAVVSV CSDQEPNLVY QGCIRSDKDK
101: RLIAVKKFSK TTWPDPKQFA TEARAIGSLR HVRLVNLIGY CCEGDERLLV SEYMPNESLT KHLFHWEKQT MEWAMRLRVA LYVAEALEYC RQSGLKLYHD
201: LNTCRVLFDE NGSPRLSCFG WMKNSKDGKN FSTNLAYTPP EYLRSGTLIP ESVVFSFGTF LLDLLSGKHI PPSHAVGTIQ KQNLNVLMDS HLEGNYPEED
301: AAMVFDLASK CLHNNPNERP EIGDIISVIT TLQQKLDVPS YTMLGISKLE KLEMEHPKSL IYDACHQMDL AALHQILEAM EYKEDEVTCE LSFQQWAQQI
401: KDVCNTRQQG DSAFRNKHFE SAIDKYTQFI EIGIMISPTV YARRSMCYLF CDQPDAALRD AMQAQCVYSD WPTAFYLQAV ALSKLNMVED SATMLKEALI
501: LEDKRGS

Arabidopsis Description

BSK11Serine/threonine-protein kinase BSK11 [Source:UniProtKB/Swiss-Prot;Acc:F4I7Y4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.