Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_07s0031g01850.t01 | |
| VIT_10s0003g02930.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G35230.1 | VIT_07s0031g01850.t01 | AT4G39400.1 | 18653891 |
| AT4G35230.1 | VIT_10s0003g02930.t01 | AT5G46330.1 | 23532072 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 58.8 | 86.47 |
| VIT_18s0001g00180.t01 | Wine grape | cytosol | 85.6 | 84.25 |
| CDX69121 | Canola | cytosol | 84.6 | 83.6 |
| KRH14029 | Soybean | cytosol | 82.8 | 83.3 |
| CDX75483 | Canola | cytosol | 84.6 | 82.94 |
| Bra011596.1-P | Field mustard | cytosol | 84.8 | 82.81 |
| AT4G35230.1 | Thale cress | cytosol | 84.8 | 82.81 |
| Os10t0542800-01 | Rice | cytosol, plasma membrane | 17.0 | 82.52 |
| CDY17529 | Canola | cytosol | 83.4 | 82.25 |
| CDX76321 | Canola | cytosol | 83.2 | 82.05 |
| Bra020806.1-P | Field mustard | cytosol | 83.2 | 82.05 |
| KRH74087 | Soybean | mitochondrion | 82.6 | 81.14 |
| GSMUA_Achr5P11610_001 | Banana | cytosol | 80.0 | 79.68 |
| GSMUA_Achr4P29650_001 | Banana | cytosol | 77.8 | 77.49 |
| HORVU1Hr1G052420.3 | Barley | cytosol | 39.2 | 77.47 |
| GSMUA_Achr5P19040_001 | Banana | plasma membrane | 80.2 | 76.97 |
| Zm00001d027523_P001 | Maize | plasma membrane | 78.4 | 76.56 |
| Zm00001d048345_P003 | Maize | plastid | 78.0 | 76.47 |
| EER95565 | Sorghum | plastid | 78.0 | 75.58 |
| VIT_17s0000g08700.t01 | Wine grape | extracellular, plasma membrane | 9.0 | 75.0 |
| HORVU4Hr1G081600.1 | Barley | mitochondrion, plastid | 77.2 | 74.95 |
| GSMUA_Achr8P13240_001 | Banana | cytosol, plastid | 76.2 | 74.27 |
| TraesCS4B01G328200.1 | Wheat | plastid | 77.6 | 74.19 |
| TraesCS1A01G203400.1 | Wheat | plastid | 77.6 | 74.05 |
| TraesCS4D01G325200.1 | Wheat | plastid | 77.0 | 73.9 |
| TraesCS5A01G500000.1 | Wheat | plastid | 77.4 | 73.86 |
| Os03t0132800-01 | Rice | plasma membrane | 78.4 | 73.82 |
| TraesCS1B01G217500.1 | Wheat | plastid | 77.6 | 73.76 |
| TraesCS1D01G206900.1 | Wheat | plastid | 77.4 | 73.43 |
| EER94565 | Sorghum | plastid | 75.0 | 71.56 |
| HORVU0Hr1G000450.1 | Barley | plastid | 38.6 | 68.93 |
| HORVU1Hr1G052350.2 | Barley | plastid | 77.0 | 68.26 |
| Zm00001d029785_P001 | Maize | plastid | 74.2 | 66.61 |
| VIT_08s0007g01520.t01 | Wine grape | mitochondrion, plastid | 63.2 | 64.36 |
| VIT_06s0004g05810.t01 | Wine grape | plastid | 61.8 | 63.06 |
| VIT_15s0046g02900.t01 | Wine grape | cytosol | 60.8 | 61.91 |
| VIT_02s0025g03550.t01 | Wine grape | cytosol | 60.4 | 61.89 |
| VIT_02s0012g01140.t01 | Wine grape | cytosol | 60.6 | 61.21 |
| Bra034987.1-P | Field mustard | cytosol | 18.4 | 56.79 |
| GSMUA_Achr1P02160_001 | Banana | cytosol | 60.4 | 55.72 |
| OQU78897 | Sorghum | cytosol, golgi, plastid | 30.2 | 40.81 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.10 | EntrezGene:100265782 | wikigene:100265782 | MapMan:11.3.2.1.5 | MapMan:18.4.1.42 |
| MapMan:26.8.1.1.4 | Gene3D:3.30.200.20 | ProteinID:CBI37790 | ProteinID:CBI37790.3 | UniProt:D7U4X1 | EMBL:FN596508 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004675 | GO:GO:0004871 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007166 | GO:GO:0007178 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009506 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009742 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0038023 |
| GO:GO:0042742 | GO:GO:0050832 | InterPro:IPR000719 | InterPro:IPR011990 | InterPro:Kinase-like_dom_sf | EntrezGene:LOC100265782 |
| wikigene:LOC100265782 | PFAM:PF07714 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF216 | InterPro:Prot_kinase_dom |
| SUPFAM:SSF48452 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | TIGR:TC56772 | TIGR:TC70128 | TIGR:TC70667 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI00015C88A3 | ArrayExpress:VIT_03s0038g03270 | EnsemblPlantsGene:VIT_03s0038g03270 | EnsemblPlants:VIT_03s0038g03270.t01 | unigene:Vvi.407 |
| RefSeq:XP_002281613 | RefSeq:XP_002281613.2 | RefSeq:XP_010646185.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3:+:2413528..2420393
Molecular Weight (calculated)
56463.7 Da
IEP (calculated)
5.702
GRAVY (calculated)
-0.507
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCCESSFLT ETHPEKDDQH HHNNSHNTQN PPFSPPSPAD GGVPSFSEFS FSDLKAATNN FSSDSIVSES GEKAPNIVYK GRLQNRRWIA VKKFTKMAWP
101: DPKQFAEEAW GVGRLRHQRL ANLIGYCCDG DERLLVAEYM PNDTLAKHLF HWENQTIEWA MRLRVALFIA EALDFCSTES RSLYHDLNAY RVLFDEDGDP
201: RLSCFGLMKN SRDGKSYSTN LAYTPPEYLR NGRVTPESVI YSFGTVLLDL LSGKHIPPSH ALDLIRDKNI ILLMDSHLEG NFSTEEATTV VGLASQCLQY
301: EPRERPNTKD LVATLAPLKT KPDVPSYVML GIPKHEDAPP TPQHPLSPMG EACSRLDLTA IHQILVMTHY RDDEGTNELS FQEWTQQMRD MLEARKRGDF
401: AFRDKDFKTA IDCYSQFVDV GTMVSPTVYA RRSLCYLLCD QPDAALRDAM QAQCVYPDWP TAFYMQSVAL AKLDMHKDAA DMLNEAAGLE EKRQKGGRGS
101: DPKQFAEEAW GVGRLRHQRL ANLIGYCCDG DERLLVAEYM PNDTLAKHLF HWENQTIEWA MRLRVALFIA EALDFCSTES RSLYHDLNAY RVLFDEDGDP
201: RLSCFGLMKN SRDGKSYSTN LAYTPPEYLR NGRVTPESVI YSFGTVLLDL LSGKHIPPSH ALDLIRDKNI ILLMDSHLEG NFSTEEATTV VGLASQCLQY
301: EPRERPNTKD LVATLAPLKT KPDVPSYVML GIPKHEDAPP TPQHPLSPMG EACSRLDLTA IHQILVMTHY RDDEGTNELS FQEWTQQMRD MLEARKRGDF
401: AFRDKDFKTA IDCYSQFVDV GTMVSPTVYA RRSLCYLLCD QPDAALRDAM QAQCVYPDWP TAFYMQSVAL AKLDMHKDAA DMLNEAAGLE EKRQKGGRGS
001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS
Arabidopsis Description
BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.