Factsheet for VIT_17s0000g08700.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 3
mitochondrion 3
plasma membrane 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g05810.t01	Wine grape	plastid	95.0	11.63
VIT_08s0007g01520.t01	Wine grape	mitochondrion, plastid	95.0	11.61
VIT_02s0025g03550.t01	Wine grape	cytosol	85.0	10.45
VIT_15s0046g02900.t01	Wine grape	cytosol	85.0	10.39
GSMUA_Achr1P15240_001	Banana	cytosol	85.0	10.37
TraesCS2A01G582500.1	Wheat	cytosol, mitochondrion	85.0	10.32
TraesCS2B01G604300.1	Wheat	mitochondrion	85.0	10.32
TraesCS2D01G597600.1	Wheat	cytosol, mitochondrion	85.0	10.32
TraesCS7D01G324900.2	Wheat	cytosol	80.0	9.96
EES11678	Sorghum	cytosol	80.0	9.8
Zm00001d026653_P004	Maize	plasma membrane	80.0	9.68
TraesCS7B01G228900.2	Wheat	cytosol	80.0	9.64
TraesCS7A01G328100.2	Wheat	cytosol	80.0	9.64
HORVU7Hr1G078530.3	Barley	cytosol	80.0	9.56
Zm00001d001780_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	80.0	9.36
VIT_18s0001g00180.t01	Wine grape	cytosol	76.67	9.06
VIT_03s0038g03270.t01	Wine grape	cytosol	75.0	9.0
HORVU2Hr1G123650.2	Barley	cytosol	83.33	8.8
VIT_02s0012g01140.t01	Wine grape	cytosol	70.0	8.48
Os04t0684200-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:35.1	ProteinID:CCB42967	ProteinID:CCB42967.1	UniProt:F6GSM0	EMBL:FN594950
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF201	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	SignalP:SignalP-noTM	UniParc:UPI0002108644
ArrayExpress:VIT_17s0000g08700	EnsemblPlantsGene:VIT_17s0000g08700	EnsemblPlants:VIT_17s0000g08700.t01	:	:	:

Description

No Description!

Coordinates

chr17:-:9967392..9967926

Molecular Weight (calculated)

7015.6 Da

IEP (calculated)

10.294

GRAVY (calculated)

-0.382

Length

60 amino acids

Sequence
(BLAST)

1: MKWAMRLRVA LYLAQALEYC SIKGRALYHN LNAYRVLFDQ DGNPRLSYFG LMKNSRDGKS

Best Arabidopsis Sequence Match ( AT5G59010.1 )
(BLAST)

001: MGPRCSKLSL CWWPTHLKST HNEASDLDNG TDDLPSFTEF SFDQLRAATC GFSTDSIVSE HGVKAPNVVY KGRLEDDRWI AVKRFNRSAW PDTRQFLEEA
101: KAVGQLRNER LANLIGFCCE GDERLLVAEF MPFETLSKHL FHWDSQPMKW SMRLRVALYL AQALEYCSSK GRALYHDLNA YRILFDQDGN PRLSCFGLMK
201: NSRDGKSYST NLAFTPPEYL RTGRVIPESV VYSFGTLLLD LLSGKHIPPS HALDLIRGKN FLMLMDSCLD GHFSNDDGTD LVRLASRCLQ YEARERPNVK
301: SLVSSLAPLQ KETDIPSHVL MGIPHGAASP KETTSLTPLG DACSRHDLTA IHEILEKVGY KDDEGVANEL SFQVWTDQIQ ETLNSKKQGD AAFKGKDFVT
401: AVECYTQFIE DGTMVSPTVF ARRCLCYLMS NMPQEALGDA MQAQVVSPEW PTAFYLQAAA LFSLGMDKDA CETLKDGTSL EAKKHNNRN

Arabidopsis Description

BSK5Serine/threonine-protein kinase BSK5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIL1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.