Factsheet for VIT_06s0004g05810.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g08700.t01	Wine grape	extracellular, plasma membrane	11.63	95.0
VIT_08s0007g01520.t01	Wine grape	mitochondrion, plastid	88.16	87.98
KRH29720	Soybean	cytosol	52.86	84.92
AT5G59010.1	Thale cress	cytosol	84.49	84.66
Bra002599.1-P	Field mustard	cytosol	83.67	83.5
CDY33003	Canola	cytosol	83.67	83.5
CDY32670	Canola	cytosol	82.45	82.62
CDY02851	Canola	cytosol	82.45	82.62
Bra020340.1-P	Field mustard	plastid	80.2	82.39
CDY67218	Canola	cytosol	82.45	82.28
KRH23152	Soybean	cytosol, endoplasmic reticulum, mitochondrion	81.63	81.97
KRH29723	Soybean	cytosol	25.51	79.62
KRH24715	Soybean	endoplasmic reticulum	83.47	78.5
VIT_15s0046g02900.t01	Wine grape	cytosol	77.14	76.99
VIT_02s0025g03550.t01	Wine grape	cytosol	76.53	76.84
VIT_18s0001g00180.t01	Wine grape	cytosol	64.49	62.2
VIT_03s0038g03270.t01	Wine grape	cytosol	63.06	61.8
VIT_02s0012g01140.t01	Wine grape	cytosol	61.63	61.01

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:100256923	wikigene:100256923	MapMan:11.3.2.1.5	MapMan:18.4.1.42
Gene3D:3.30.200.20	ProteinID:CBI16029	ProteinID:CBI16029.3	UniProt:D7SK53	EMBL:FN594951	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009506	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009737	GO:GO:0009742	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100256923	wikigene:LOC100256923	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF18
InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TIGR:TC58022	TIGR:TC66435
InterPro:TPR-like_helical_dom_sf	UniParc:UPI00015C7ED4	ArrayExpress:VIT_06s0004g05810	EnsemblPlantsGene:VIT_06s0004g05810	EnsemblPlants:VIT_06s0004g05810.t01	RefSeq:XP_002280021
RefSeq:XP_002280021.2	RefSeq:XP_010650958.1	:	:	:	:

Description

No Description!

Coordinates

chr6:+:6553181..6562061

Molecular Weight (calculated)

55133.5 Da

IEP (calculated)

5.545

GRAVY (calculated)

-0.407

Length

490 amino acids

Sequence
(BLAST)

001: MGARCSKFSL CWWPHLKSNS QDSFDLENGG KNEGDSLPSF GEFSLDQLRA ATSGFSSDNI VSEHGEKAPN VVYKGKLEDD RWIAVKRFNK SAWPDSRQFL
101: EEARAVGQLR NERLANLIGC CCEGEERLLV AEFMPNETLS KHLFHWEAQP MKWAMRLRVA LYLAQALEYC SSKGRALYHD LNAYRVLFDQ DGNPRLSCFG
201: LMKNSRDGKS YSTNLAFTPP EYLRTGRVTA ESVVYSFGTL LLDLLSGKHI PPSHALDLIR GKNFLMLMDS CLEGHFSNDD GTELVRLASR CLQYEPRERP
301: NARSLVTSLT PLQKETEVPS YVLMGIQQET VSPAETLPLT PLGEACSRMD LTAIHEILEK VGYKDDEGVA NELSFQMWTN QIQETLNSKK RGDTAFRAKD
401: FTTAIECYTQ FIDGGTMVSP TVFARRCLCY LMNEMPQEAL GDAMQAQVVS PDWSTAFYLQ AAALFSLGMD NDARETLKDG TTLEAKRNRK

Best Arabidopsis Sequence Match ( AT5G59010.1 )
(BLAST)

001: MGPRCSKLSL CWWPTHLKST HNEASDLDNG TDDLPSFTEF SFDQLRAATC GFSTDSIVSE HGVKAPNVVY KGRLEDDRWI AVKRFNRSAW PDTRQFLEEA
101: KAVGQLRNER LANLIGFCCE GDERLLVAEF MPFETLSKHL FHWDSQPMKW SMRLRVALYL AQALEYCSSK GRALYHDLNA YRILFDQDGN PRLSCFGLMK
201: NSRDGKSYST NLAFTPPEYL RTGRVIPESV VYSFGTLLLD LLSGKHIPPS HALDLIRGKN FLMLMDSCLD GHFSNDDGTD LVRLASRCLQ YEARERPNVK
301: SLVSSLAPLQ KETDIPSHVL MGIPHGAASP KETTSLTPLG DACSRHDLTA IHEILEKVGY KDDEGVANEL SFQVWTDQIQ ETLNSKKQGD AAFKGKDFVT
401: AVECYTQFIE DGTMVSPTVF ARRCLCYLMS NMPQEALGDA MQAQVVSPEW PTAFYLQAAA LFSLGMDKDA CETLKDGTSL EAKKHNNRN

Arabidopsis Description

BSK5Serine/threonine-protein kinase BSK5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIL1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.