Factsheet for VIT_15s0046g02900.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_07s0031g01850.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00710.1	VIT_07s0031g01850.t01	AT4G39400.1	18653891

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65064	Soybean	endoplasmic reticulum	85.54	85.54
KRH48161	Soybean	cytosol	85.34	85.34
VIT_17s0000g08700.t01	Wine grape	extracellular, plasma membrane	10.39	85.0
VIT_02s0025g03550.t01	Wine grape	cytosol	83.5	84.02
CDY07203	Canola	cytosol	80.45	81.61
GSMUA_Achr1P15240_001	Banana	cytosol	81.47	81.3
AT4G00710.1	Thale cress	cytosol	80.86	81.19
CDX74345	Canola	cytosol	81.06	81.06
CDX91898	Canola	cytosol	80.86	80.86
Bra000962.1-P	Field mustard	cytosol	80.86	80.86
CDY51145	Canola	cytosol	79.63	80.79
Bra037353.1-P	Field mustard	cytosol	79.43	80.58
VIT_06s0004g05810.t01	Wine grape	plastid	76.99	77.14
VIT_08s0007g01520.t01	Wine grape	mitochondrion, plastid	75.97	75.97
EES11678	Sorghum	cytosol	74.75	74.9
TraesCS2A01G582500.1	Wheat	cytosol, mitochondrion	74.54	74.09
TraesCS2D01G597600.1	Wheat	cytosol, mitochondrion	74.54	74.09
TraesCS2B01G604300.1	Wheat	mitochondrion	74.34	73.89
Zm00001d026653_P004	Maize	plasma membrane	74.54	73.79
Zm00001d001780_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	75.15	71.93
AT1G01740.2	Thale cress	cytosol	70.26	71.43
CDX75149	Canola	cytosol, mitochondrion, peroxisome	10.39	70.83
TraesCS7D01G324900.2	Wheat	cytosol	68.84	70.12
TraesCS7B01G228900.2	Wheat	cytosol	70.88	69.88
HORVU7Hr1G078530.3	Barley	cytosol	70.88	69.32
TraesCS7A01G328100.2	Wheat	cytosol	70.26	69.28
CDX90056	Canola	cytosol	65.99	66.39
Bra033237.1-P	Field mustard	cytosol	65.99	66.39
CDY15155	Canola	cytosol	65.58	65.98
HORVU2Hr1G123650.2	Barley	cytosol	74.13	64.08
Os04t0684200-01	Rice	plasma membrane	14.87	62.93
VIT_03s0038g03270.t01	Wine grape	cytosol	61.91	60.8
VIT_02s0012g01140.t01	Wine grape	cytosol	60.29	59.8
VIT_18s0001g00180.t01	Wine grape	cytosol	61.71	59.65
CDY64342	Canola	extracellular	7.74	58.46
CDY20930	Canola	extracellular, mitochondrion	7.94	58.21

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:100249852	wikigene:100249852	MapMan:11.3.2.1.5	MapMan:18.4.1.42
Gene3D:3.30.200.20	ProteinID:CBI40347	ProteinID:CBI40347.3	UniProt:D7UC82	EMBL:FN596755	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100249852	wikigene:LOC100249852	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF521
InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00015CA808
ArrayExpress:VIT_15s0046g02900	EnsemblPlantsGene:VIT_15s0046g02900	EnsemblPlants:VIT_15s0046g02900.t01	unigene:Vvi.1496	RefSeq:XP_002272416	RefSeq:XP_002272416.1
RefSeq:XP_010661772.1	:	:	:	:	:

Description

No Description!

Coordinates

chr15:-:19605169..19611792

Molecular Weight (calculated)

55114.7 Da

IEP (calculated)

5.803

GRAVY (calculated)

-0.389

Length

491 amino acids

Sequence
(BLAST)

001: MGCQCSKLAP CCWDSQFKGS VLEAPDVDNG EKSEVDYLPV FCEYTFEQLK NATSGFAVEN IVSEHGEKAP NVVYKGKLEN QRRIAVKRFN RVAWPDARQF
101: SEEARAVGQL RNHRLANLLG CCCEDNERLL VAEYMPNETL AKHLFHWETQ PMKWAMRLRV VLHLAQALEY CTGRGRALYH DLNAYRILFD EDGNPRLSCF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVIYSFGT LLLDLLSGKH IPPSHALDLI RDRNLQMLTD SCLEGQFTND DGTELVRLAS RCLQYEPRER
301: PNPKSLVAAL TPLQKETEVP SHVLMGIPHS ASFSPLSPLG EACSRMDLTA IHEILESVGY KDDEGMTNEL SFQMWTDQMQ ETLNSKKKGD AAFRQKDFRA
401: AIDCYTQFID VGTMVSPTVC ARRSLCYLMS DMPQEALNDA MQAQVISPVW HIASYLQAAA LTGLGMENEA QAALKDGTTL EAQRNTPSGQ K

Best Arabidopsis Sequence Match ( AT4G00710.1 )
(BLAST)

001: MGGQCSSLSC CRNTSHKTAV LEAPDVDNGE SSEITDVPNF REYTLEQLKA ATSGFAVEYI VSEHGEKAPN VVYKGKLENQ KKIAVKRFTR MAWPDSRQFL
101: EEARSVGQLR SERMANLLGC CCEGDERLLV AEFMPNETLA KHLFHWETQP MKWTMRLRVV LYLAQALEYC TSKGRTLYHD LNAYRVLFDE ECNPRLSTFG
201: LMKNSRDGKS YSTNLAFTPP EYLRTGRITP ESVIYSFGTL LLDLLSGKHI PPSHALDLIR DRNLQTLTDS CLDGQFSDSD GTELVRLASR CLQYEARERP
301: NTKSLVTALT PLQKETEVLS HVLMGLPHSG SVSPLSPLGE ACSRRDLTAM LEILEKLGYK DDEGVTNELS FHMWTDQMQE SLNSKKKGDV AFRQKDFREA
401: IECYTQFIDG GMISPTVCAR RSLCYLMSDM PKEALDDAIQ AQVISPVWHV ASYLQSASLG ILGMEKESQI ALKEGSNLEA KMNGVPRVK

Arabidopsis Description

BSK3Serine/threonine-protein kinase BSK3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4L3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.