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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX72702
CDX90332
CDY12143
CDY41977
CDY53185
CDY66903
CDY66904

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G00710.1 CDX72702 AT4G39400.1 18653891
AT4G00710.1 CDX90332 AT4G39400.1 18653891
AT4G00710.1 CDY12143 AT4G39400.1 18653891
AT4G00710.1 CDY41977 AT4G39400.1 18653891
AT4G00710.1 CDY53185 AT4G39400.1 18653891
AT4G00710.1 CDY66903 AT4G39400.1 18653891
AT4G00710.1 CDY66904 AT4G39400.1 18653891
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74345 Canola cytosol 99.39 99.39
Bra000962.1-P Field mustard cytosol 98.78 98.78
CDY07203 Canola cytosol 94.3 95.66
CDY51145 Canola cytosol 93.69 95.04
AT4G00710.1 Thale cress cytosol 92.06 92.43
CDY12866 Canola nucleus 29.94 84.48
VIT_15s0046g02900.t01 Wine grape cytosol 80.86 80.86
KRH65064 Soybean endoplasmic reticulum 79.02 79.02
KRH48161 Soybean cytosol 79.02 79.02
GSMUA_Achr1P15240_001 Banana cytosol 74.75 74.59
CDY66348 Canola cytosol 72.51 73.86
CDY65190 Canola cytosol 47.45 73.5
CDY68942 Canola plasma membrane 72.51 73.25
CDY64092 Canola cytosol 72.3 73.2
CDY34359 Canola cytosol 72.71 73.16
CDY25502 Canola cytosol 72.51 72.95
CDX90056 Canola cytosol 71.28 71.72
CDY15155 Canola cytosol 71.08 71.52
EES11678 Sorghum cytosol 70.47 70.61
TraesCS2A01G582500.1 Wheat cytosol, mitochondrion 70.88 70.45
TraesCS2D01G597600.1 Wheat cytosol, mitochondrion 70.88 70.45
TraesCS2B01G604300.1 Wheat mitochondrion 70.67 70.24
Zm00001d026653_P004 Maize plasma membrane 70.47 69.76
CDX75149 Canola cytosol, mitochondrion, peroxisome 10.18 69.44
CDY33003 Canola cytosol 68.84 68.84
CDY67218 Canola cytosol 68.43 68.43
Zm00001d001780_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 71.08 68.03
CDY32670 Canola cytosol 67.62 67.89
CDY02851 Canola cytosol 67.41 67.69
CDY13169 Canola cytosol 67.62 67.62
CDX76175 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 67.41 67.55
TraesCS7B01G228900.2 Wheat cytosol 67.41 66.47
TraesCS7D01G324900.2 Wheat cytosol 65.17 66.39
HORVU7Hr1G078530.3 Barley cytosol 67.62 66.14
TraesCS7A01G328100.2 Wheat cytosol 66.8 65.86
HORVU2Hr1G123650.2 Barley cytosol 70.47 60.92
Os04t0684200-01 Rice plasma membrane 13.85 58.62
CDY70900 Canola mitochondrion 37.07 58.52
CDY70772 Canola mitochondrion 37.07 58.52
CDY69804 Canola cytosol 55.4 58.49
CDY33480 Canola cytosol 58.04 58.28
CDX77672 Canola cytosol 58.04 58.28
CDX69121 Canola cytosol 59.67 57.91
CDX75483 Canola cytosol 59.67 57.45
CDY22182 Canola cytosol 44.4 57.07
CDY44497 Canola cytosol 57.43 56.85
CDX76321 Canola cytosol 58.66 56.8
CDY17529 Canola cytosol 58.25 56.41
CDX78818 Canola cytosol 56.82 56.25
CDY44690 Canola mitochondrion 56.21 56.21
CDX73964 Canola cytosol 55.6 55.38
CDY13171 Canola cytosol 10.39 54.84
CDY10478 Canola mitochondrion 51.93 54.72
CDY07908 Canola cytosol 54.58 54.36
CDY40323 Canola cytosol 53.16 53.16
CDY64342 Canola extracellular 6.92 52.31
CDY20930 Canola extracellular, mitochondrion 7.13 52.24
CDY48109 Canola plastid 22.4 52.13
CDY01511 Canola cytosol 35.85 50.0
CDX90430 Canola cytosol 35.64 48.75
CDX96069 Canola cytosol, plastid 46.84 47.82
CDY01510 Canola cytosol 46.23 47.59
CDY01839 Canola cytosol, plastid 46.44 47.4
CDY07880 Canola cytosol 36.86 46.65
CDY03206 Canola extracellular, plasma membrane 7.94 45.88
CDY26795 Canola cytosol 42.97 45.28
CDY02219 Canola cytosol 42.77 44.97
CDY47487 Canola cytosol 41.96 44.21
CDX73221 Canola cytosol 6.92 38.64
CDY66812 Canola cytosol 9.16 38.46
CDY13173 Canola cytosol 6.11 37.04
Protein Annotations
Gene3D:1.10.510.10Gene3D:1.25.40.10MapMan:11.3.2.1.5MapMan:18.4.1.42Gene3D:3.30.200.20GO:A0A078DXC0
EnsemblPlants:CDX91898ProteinID:CDX91898ProteinID:CDX91898.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00153525001InterPro:IPR000719InterPro:IPR011990InterPro:Kinase-like_dom_sfPFAM:PF07714PFscan:PS50011
PANTHER:PTHR27001PANTHER:PTHR27001:SF126InterPro:Prot_kinase_domSUPFAM:SSF48452SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:TPR-like_helical_dom_sfUniParc:UPI0004EEF2AC::::
Description
BnaC03g32000D
Coordinates
chrLK031870:-:671652..674135
Molecular Weight (calculated)
55218.8 Da
IEP (calculated)
6.298
GRAVY (calculated)
-0.435
Length
491 amino acids
Sequence
(BLAST)
001: MGGQCSNLGR CCGNSSHKTA VLEAPPHVEN GDNNDITDVP AFREYTLDQL KSATCGFAVE YIVSEHGEKA PNVVYKGKLE NQKKIAVKRF TRMAWPDARQ
101: FLEEARSVGQ LRSERMANLL GCCCEGDERL LVAEFMPNET LAKHLFHWET QPMKWTMRLR VVLYLAQALE YCTNQGRILY HDLNAYRVLF DEECNPRLST
201: FGLMKNSRDG KSYSTNLAFT PPEYLRTGRI TPESVIYSFG TLLLDVLSGK HIPPSHALDL IRDRNLQTLT DSCLDGQFSE SDGTELVRLA SRCLQYEARE
301: RPNTKSLVTA LTPLQKDTEV PSHVLMGLPH SGSVSPLSPL GEACSRKDLT AMLEILDKLG YKDDEGVTNE LSFQMWTDQM QESLNSKKKG DVAFRQKDFR
401: EAIEYYTQFI DGGMVSPTVC ARRSLCYLMS DMPKEALDDA IQAQVISPVW HVASYLQSAS LSFLGMENES QMALKEGSNL EAKRNSPSKR K
Best Arabidopsis Sequence Match ( AT4G00710.1 )
(BLAST)
001: MGGQCSSLSC CRNTSHKTAV LEAPDVDNGE SSEITDVPNF REYTLEQLKA ATSGFAVEYI VSEHGEKAPN VVYKGKLENQ KKIAVKRFTR MAWPDSRQFL
101: EEARSVGQLR SERMANLLGC CCEGDERLLV AEFMPNETLA KHLFHWETQP MKWTMRLRVV LYLAQALEYC TSKGRTLYHD LNAYRVLFDE ECNPRLSTFG
201: LMKNSRDGKS YSTNLAFTPP EYLRTGRITP ESVIYSFGTL LLDLLSGKHI PPSHALDLIR DRNLQTLTDS CLDGQFSDSD GTELVRLASR CLQYEARERP
301: NTKSLVTALT PLQKETEVLS HVLMGLPHSG SVSPLSPLGE ACSRRDLTAM LEILEKLGYK DDEGVTNELS FHMWTDQMQE SLNSKKKGDV AFRQKDFREA
401: IECYTQFIDG GMISPTVCAR RSLCYLMSDM PKEALDDAIQ AQVISPVWHV ASYLQSASLG ILGMEKESQI ALKEGSNLEA KMNGVPRVK
Arabidopsis Description
BSK3Serine/threonine-protein kinase BSK3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4L3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.