CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96069	Canola	cytosol, plastid	98.13	98.13
AT1G50990.1	Thale cress	cytosol	79.0	74.95
CDX75149	Canola	cytosol, mitochondrion, peroxisome	8.94	59.72
VIT_18s0001g00180.t01	Wine grape	cytosol	61.12	57.87
PGSC0003DMT400025819	Potato	cytosol	59.46	57.43
Solyc04g082260.2.1	Tomato	plastid	59.25	57.23
CDX69121	Canola	cytosol	59.04	56.13
CDX75483	Canola	cytosol	59.25	55.88
CDX76321	Canola	cytosol	58.0	55.03
CDY17529	Canola	cytosol	58.0	55.03
CDY65190	Canola	cytosol	33.68	51.1
CDY64342	Canola	extracellular	6.86	50.77
CDY20930	Canola	extracellular, mitochondrion	7.07	50.75
CDY67218	Canola	cytosol	50.1	49.08
CDY33003	Canola	cytosol	50.1	49.08
CDY32670	Canola	cytosol	49.69	48.88
CDY22182	Canola	cytosol	38.67	48.69
CDY02851	Canola	cytosol	49.48	48.67
CDY34359	Canola	cytosol	48.65	47.95
CDY64092	Canola	cytosol	48.23	47.84
CDY25502	Canola	cytosol	48.44	47.75
CDY68942	Canola	plasma membrane	48.23	47.74
CDY66348	Canola	cytosol	47.82	47.72
CDY07203	Canola	cytosol	47.82	47.52
CDY13169	Canola	cytosol	48.44	47.45
CDY51145	Canola	cytosol	47.61	47.31
CDX76175	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	48.02	47.14
CDY03206	Canola	extracellular, plasma membrane	8.32	47.06
CDX74345	Canola	cytosol	47.4	46.44
CDX91898	Canola	cytosol	47.4	46.44
CDX77672	Canola	cytosol	46.78	46.01
CDY33480	Canola	cytosol	46.78	46.01
CDY26795	Canola	cytosol	44.49	45.92
CDX78818	Canola	cytosol	47.19	45.77
CDY44497	Canola	cytosol	47.19	45.77
CDY07880	Canola	cytosol	36.8	45.62
CDY47487	Canola	cytosol	44.07	45.49
CDY69804	Canola	cytosol	43.66	45.16
CDY13171	Canola	cytosol	8.73	45.16
CDY10478	Canola	mitochondrion	43.66	45.06
CDY02219	Canola	cytosol	43.66	44.97
CDY01511	Canola	cytosol	32.64	44.6
CDX90430	Canola	cytosol	33.06	44.29
CDY44690	Canola	mitochondrion	44.91	43.99
CDY40323	Canola	cytosol	44.7	43.79
CDX73964	Canola	cytosol	44.7	43.61
CDX73221	Canola	cytosol	7.9	43.18
CDX90056	Canola	cytosol	43.66	43.03
CDY07908	Canola	cytosol	43.66	42.6
CDY15155	Canola	cytosol	43.04	42.42
CDY70772	Canola	mitochondrion	27.23	42.12
CDY70900	Canola	mitochondrion	27.23	42.12
CDY12866	Canola	nucleus	14.35	39.66
CDY01510	Canola	cytosol	39.09	39.41
CDY48109	Canola	plastid	17.05	38.86
CDY13173	Canola	cytosol	6.24	37.04
CDY66812	Canola	cytosol	8.32	34.19

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:A0A078EM78
EnsemblPlants:CDY01839	ProteinID:CDY01839	ProteinID:CDY01839.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00113012001	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EE6A29	SEG:seg	:	:	:

Description

BnaC06g28790D

Coordinates

chrLK031929:+:778274..780437

Molecular Weight (calculated)

54551.7 Da

IEP (calculated)

6.200

GRAVY (calculated)

-0.443

Length

481 amino acids

Sequence
(BLAST)

001: MGCCQSSFLK PLSLRDKKTS GDVSARRGGK RSNRNNRHRV SNEGVGNGRG WHFSTVPDFS EFSAADLREA TNNFSVNAVV SVCSDQTPNV VYQGCLKDDM
101: RQIAVKKFSK STWPDPKQFA AEARDIGKMR HTRLVNLIGY CCDGDERLLV SEYMPNDTLT KHLFHWEKQT MEWAMRLRVA LYVAEALEYC RQSGRTLYHD
201: LNAYRVLFDE NGNPRLSCFG WMKDSKDGKN FSTNLAYTPP EYLRDGTLIP ESVVFSFGTF LLDLVSGKHV PPSHAVDTIQ KQNLPVFIDS HLEGNYPDEE
301: AATVFELASK CLENNPKDRP EIKDIISVLA TLQHKVNIPS YEMLGISKLE NPEKEPESSQ LYDASHRMDL TALHQILELA DYNDDVTCEL SFQQWSQQIK
401: DFIETGIMIS PTVYARRSIC HLFCDQADAA LRDAMQAQCV YPNWPTALYL QAVALAKLNM LEDSGTMLKE AKILEDKRLI N

Best Arabidopsis Sequence Match ( AT1G50990.1 )
(BLAST)

001: MGCCQSSFLK PSSLHDKKIT SDDLSGRRGK GAKRGNRHRH ANINEGRGWH FSDVPDFSEF SASVLRDATN NFNKNAVVSV CSDQEPNLVY QGCIRSDKDK
101: RLIAVKKFSK TTWPDPKQFA TEARAIGSLR HVRLVNLIGY CCEGDERLLV SEYMPNESLT KHLFHWEKQT MEWAMRLRVA LYVAEALEYC RQSGLKLYHD
201: LNTCRVLFDE NGSPRLSCFG WMKNSKDGKN FSTNLAYTPP EYLRSGTLIP ESVVFSFGTF LLDLLSGKHI PPSHAVGTIQ KQNLNVLMDS HLEGNYPEED
301: AAMVFDLASK CLHNNPNERP EIGDIISVIT TLQQKLDVPS YTMLGISKLE KLEMEHPKSL IYDACHQMDL AALHQILEAM EYKEDEVTCE LSFQQWAQQI
401: KDVCNTRQQG DSAFRNKHFE SAIDKYTQFI EIGIMISPTV YARRSMCYLF CDQPDAALRD AMQAQCVYSD WPTAFYLQAV ALSKLNMVED SATMLKEALI
501: LEDKRGS

Arabidopsis Description

BSK11Serine/threonine-protein kinase BSK11 [Source:UniProtKB/Swiss-Prot;Acc:F4I7Y4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.