CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040944.1-P	Field mustard	mitochondrion	60.25	62.62
CDY34359	Canola	cytosol	93.38	60.66
CDY66348	Canola	cytosol	92.11	60.58
CDY25502	Canola	cytosol	92.74	60.25
CDY64092	Canola	cytosol	91.8	60.0
CDY68942	Canola	plasma membrane	91.8	59.88
AT1G63500.1	Thale cress	cytosol	90.54	58.93
CDY64342	Canola	extracellular	11.67	56.92
CDY20930	Canola	extracellular, mitochondrion	11.99	56.72
CDX75149	Canola	cytosol, mitochondrion, peroxisome	12.3	54.17
VIT_02s0025g03550.t01	Wine grape	cytosol	80.76	52.46
PGSC0003DMT400024464	Potato	cytosol	78.86	51.33
Solyc11g064890.1.1	Tomato	cytosol	78.55	51.13
CDY70772	Canola	mitochondrion	48.27	49.2
CDY70900	Canola	mitochondrion	48.27	49.2
KRH59867	Soybean	endoplasmic reticulum	75.39	48.88
CDY07203	Canola	cytosol	74.45	48.76
KRH41166	Soybean	cytosol	75.08	48.67
GSMUA_Achr1P15240_001	Banana	cytosol	75.39	48.58
CDY13171	Canola	cytosol	14.2	48.39
Solyc12g099830.1.1	Tomato	cytosol	74.13	48.35
PGSC0003DMT400012025	Potato	cytosol	73.82	48.15
CDY51145	Canola	cytosol	73.5	48.14
CDX91898	Canola	cytosol	73.5	47.45
CDX74345	Canola	cytosol	73.5	47.45
CDY48109	Canola	plastid	31.55	47.39
EES11678	Sorghum	cytosol	71.92	46.53
TraesCS7D01G324900.2	Wheat	cytosol	70.66	46.47
Zm00001d026653_P004	Maize	plasma membrane	72.56	46.37
TraesCS2D01G597600.1	Wheat	cytosol, mitochondrion	72.24	46.36
TraesCS2A01G582500.1	Wheat	cytosol, mitochondrion	72.24	46.36
CDX76175	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	71.61	46.33
TraesCS2B01G604300.1	Wheat	mitochondrion	71.92	46.15
CDY13169	Canola	cytosol	70.35	45.42
TraesCS7B01G228900.2	Wheat	cytosol	70.66	44.98
Zm00001d001780_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	72.56	44.83
CDY33003	Canola	cytosol	69.4	44.81
CDY32670	Canola	cytosol	69.09	44.79
TraesCS7A01G328100.2	Wheat	cytosol	70.35	44.78
CDY67218	Canola	cytosol	69.09	44.6
CDY02851	Canola	cytosol	68.77	44.58
HORVU7Hr1G078530.3	Barley	cytosol	70.35	44.42
HORVU2Hr1G123650.2	Barley	cytosol	71.92	40.14
CDX90056	Canola	cytosol	60.57	39.34
CDY15155	Canola	cytosol	60.57	39.34
CDY69804	Canola	cytosol	57.41	39.14
CDX69121	Canola	cytosol	62.46	39.13
CDX75483	Canola	cytosol	62.46	38.82
CDY10478	Canola	mitochondrion	56.78	38.63
CDX76321	Canola	cytosol	61.2	38.26
CDY44497	Canola	cytosol	59.62	38.1
CDX78818	Canola	cytosol	59.31	37.9
CDY17529	Canola	cytosol	60.57	37.87
CDY33480	Canola	cytosol	58.36	37.83
CDX77672	Canola	cytosol	58.36	37.83
CDX73964	Canola	cytosol	58.04	37.32
CDY44690	Canola	mitochondrion	57.41	37.07
CDY40323	Canola	cytosol	57.1	36.86
CDY66812	Canola	cytosol	13.56	36.75
CDY07908	Canola	cytosol	56.78	36.51
CDY13173	Canola	cytosol	9.15	35.8
CDY07880	Canola	cytosol	43.22	35.31
CDX73221	Canola	cytosol	9.78	35.23
CDY22182	Canola	cytosol	41.32	34.29
CDY01839	Canola	cytosol, plastid	51.1	33.68
CDX96069	Canola	cytosol, plastid	51.1	33.68
CDY01510	Canola	cytosol	47.32	31.45
CDY26795	Canola	cytosol	44.16	30.04
CDY02219	Canola	cytosol	43.22	29.34
CDY47487	Canola	cytosol	42.9	29.18
CDY01511	Canola	cytosol	29.97	26.99
CDX90430	Canola	cytosol	30.28	26.74
CDY03206	Canola	extracellular, plasma membrane	2.84	10.59
CDY12866	Canola	nucleus	5.05	9.2
Os04t0684200-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:18.4.1.42	GO:A0A078JFF0	UniProt:A0A078JFF0	EnsemblPlants:CDY65190
ProteinID:CDY65190	ProteinID:CDY65190.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00045355001
InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF147	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EE13EF

Description

BnaCnng45960DBnaCnng45960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFF0]

Coordinates

chrLK034685:-:2546..4315

Molecular Weight (calculated)

35475.3 Da

IEP (calculated)

6.785

GRAVY (calculated)

-0.315

Length

317 amino acids

Sequence
(BLAST)

001: MPNETLAKHL FHWESQPMKW AMRLRVALHI AQALEYCTGK GRALYHDLNA YRVLFDDDSN PRLSCFGLMK NSRDGKSYST NLAFTPPEYL RTGRVTPESV
101: MYSYGTLLLD LLSGKHIPPS HALDLIRDRN IQMLIDSCLE GQFSNACSMS LVNGLTQNLY ASTTPLSPHG QACLRTDLTA IHEIIEKLGY KDDEGAATEL
201: SFQMWTNQMQ DSLNFKKKGD IAFRHKDFAN AAECYSRFIE GGTMVSPTVY ARRSLCHLMN DMPQEALNDA VQSQVISTAW HIASYLQAVA LSALGQENEG
301: HAALKDGSML ESKRNAL

Best Arabidopsis Sequence Match ( AT1G63500.1 )
(BLAST)

001: MGCEVSKLCA FCCVSDPEGS NHGVTGLDED RRGEGNDLPQ FREFSIETLR NATSGFATEN IVSEHGEKAP NVVYKGKLDN QRRIAVKRFN RKAWPDSRQF
101: LEEAKAVGQL RNYRMANLLG CCYEGEERLL VAEFMPNETL AKHLFHWESQ PMKWAMRLRV ALHIAQALEY CTGKGRALYH DLNAYRVLFD DDSNPRLSCF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVMYSYGT LLLDLLSGKH IPPSHALDLI RDRNIQMLID SCLEGQFSSD DGTELIRLAS RCLQYEPRER
301: PNPKSLVTAM IPLQKDLETP SHQLMGIPSS ASTTPLSPLG EACLRTDLTA IHEILEKLSY KDDEGAATEL SFQMWTNQMQ DSLNFKKKGD VAFRHKEFAN
401: AIDCYSQFIE GGTMVSPTVY ARRSLCYLMN EMPQEALNDA MQAQVISPAW HIASYLQAVA LSALGQENEA HAALKDGSML ESKRNRL

Arabidopsis Description

BSK7BSK7 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.