CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013030.1-P	Field mustard	nucleus	99.36	99.78
CDY07880	Canola	cytosol	78.16	94.07
CDY66812	Canola	cytosol	19.27	76.92
CDY26795	Canola	cytosol	73.88	74.03
CDY47487	Canola	cytosol	73.02	73.18
CDX73221	Canola	cytosol	13.28	70.45
AT2G17090.1	Thale cress	cytosol	64.45	64.73
CDX69121	Canola	cytosol	57.6	53.16
CDX75483	Canola	cytosol	57.6	52.75
CDY17529	Canola	cytosol	57.17	52.66
CDX76321	Canola	cytosol	56.96	52.47
CDX75149	Canola	cytosol, mitochondrion, peroxisome	7.92	51.39
Solyc04g082260.2.1	Tomato	plastid	54.18	50.8
PGSC0003DMT400025819	Potato	cytosol	54.18	50.8
VIT_18s0001g00180.t01	Wine grape	cytosol	54.82	50.39
CDY32670	Canola	cytosol	47.54	45.4
CDY02851	Canola	cytosol	47.54	45.4
CDY33003	Canola	cytosol	47.11	44.81
CDY67218	Canola	cytosol	46.9	44.6
CDY66348	Canola	cytosol	45.18	43.78
CDY01839	Canola	cytosol, plastid	44.97	43.66
CDY68942	Canola	plasma membrane	45.4	43.62
CDY13169	Canola	cytosol	45.82	43.58
CDY64092	Canola	cytosol	45.18	43.51
CDX96069	Canola	cytosol, plastid	44.75	43.45
CDY34359	Canola	cytosol	45.4	43.44
CDY25502	Canola	cytosol	45.4	43.44
CDY65190	Canola	cytosol	29.34	43.22
CDX76175	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	44.97	42.86
CDX91898	Canola	cytosol	44.97	42.77
CDX74345	Canola	cytosol	44.97	42.77
CDY07203	Canola	cytosol	44.33	42.77
CDY51145	Canola	cytosol	44.11	42.56
CDY44497	Canola	cytosol	44.11	41.53
CDX78818	Canola	cytosol	44.11	41.53
CDX77672	Canola	cytosol	42.61	40.7
CDY33480	Canola	cytosol	42.61	40.7
CDY20930	Canola	extracellular, mitochondrion	5.78	40.3
CDY12866	Canola	nucleus	14.99	40.23
CDY64342	Canola	extracellular	5.57	40.0
CDY03206	Canola	extracellular, plasma membrane	7.28	40.0
CDY13171	Canola	cytosol	7.92	39.78
CDX90056	Canola	cytosol	40.47	38.73
CDX73964	Canola	cytosol	40.47	38.34
CDY69804	Canola	cytosol	38.12	38.28
CDY10478	Canola	mitochondrion	38.12	38.2
CDY07908	Canola	cytosol	39.83	37.73
CDY22182	Canola	cytosol	30.62	37.43
CDY44690	Canola	mitochondrion	39.19	37.27
CDY15155	Canola	cytosol	38.54	36.89
CDY40323	Canola	cytosol	38.54	36.66
CDY70772	Canola	mitochondrion	23.77	35.69
CDY70900	Canola	mitochondrion	23.77	35.69
CDY01510	Canola	cytosol	36.4	35.64
CDY01511	Canola	cytosol	26.34	34.94
CDX90430	Canola	cytosol	26.12	33.98
CDY13173	Canola	cytosol	5.57	32.1
CDY48109	Canola	plastid	14.35	31.75

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:A0A078ENE0
EnsemblPlants:CDY02219	ProteinID:CDY02219	ProteinID:CDY02219.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00113634001	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF216	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EED3DE	:	:	:	:

Description

BnaA03g39480D

Coordinates

chrLK031932:+:767624..769897

Molecular Weight (calculated)

52701.7 Da

IEP (calculated)

5.142

GRAVY (calculated)

-0.340

Length

467 amino acids

Sequence
(BLAST)

001: MGCCNSSPSM EDPPPQNVHQ NHGGSDSQIK KFSFSDLNKA TENFYLKNIV SENGGETSDT VYKGRLHNGG FIAVKKFMNM AWSDSNQFVE EAHRVGKLRH
101: NSVVNLIGYC CDGNERLLVA AFMPNDTLAK RLFHRKNQTM EWEMRLRVAF CVAQALDFCS GGGFTSYNNL NAYSVLFNED GDACLSCFGL MKEFKDDQRA
201: TGSVNSESLI FGFGTLLMNL LSGKQIPPSH APEMIHGKSV VELIDPNLKG KFSAEEATII FKLASQCLQY EDIESLNTKD LVTTLETLHT KTNVRALSYG
301: MLEMAKRQDV SLNQLSTLGD ACLKMDLKAI HKILVMAEDD KELVEFSFEE WLEEVKDIQE VRKHGDQAFL EQDFETAIDC YSQLIESRRM VYPSVYARRC
401: LCYLFCNQPD RALKDGMVAQ QLFPDWPTAF YLQSVALSQL NMITDSADTL KEATLLEAKR QHQEKES

Best Arabidopsis Sequence Match ( AT2G17090.1 )
(BLAST)

001: MGCCYSLSST VDPVQDHTTD ASSEPRNGGG EDPPLTKFSF SALKTATNHF SPENIVSDQT SDVVFKGRLQ NGGFVAIKRF NNMAWSDPKL FLEEAQRVGK
101: LRHKRLVNLI GYCCDGDKRF LVADFMANDT LAKRLFQRKY QTMDWSIRLR VAYFVAEALD YCNTAGFASY NNLSAYKVLF DEDGDACLSC FGLMKEINND
201: QITTGSVNPE NVIYRFGTVL VNLLSGKQIP PSHAPEMIHR KNVFKLMDPY LKGKFSIDEA NVVYKLASQC LKYEGQESPN TKEIVATLET LQTRTEAPSY
301: EVVEMTNQEK DASSSSNLSP LGEACLRMDL ASIHSILVLA GYDDDKDIIE LSFEEWIQEV KELQDVRRNG DRAFVEQDFK TAIACYSQFV EERSLVYPSV
401: YARRSLSYLF CDEPEKALLD GMHAQGVFPD WPTAFYLQSV ALAKLDMNTD SADTLKEAAL LEVKK

Arabidopsis Description

BSK12Probable inactive receptor-like kinase SSP [Source:UniProtKB/Swiss-Prot;Acc:Q7XJT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.