Factsheet for AT2G17090.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07880	Canola	cytosol	56.56	67.78
CDY26795	Canola	cytosol	66.67	66.52
Bra037282.1-P	Field mustard	cytosol	66.02	65.88
CDY47487	Canola	cytosol	65.81	65.67
Bra013030.1-P	Field mustard	nucleus	64.95	64.95
CDY02219	Canola	cytosol	64.73	64.45
CDY66812	Canola	cytosol	15.91	63.25
CDX73221	Canola	cytosol	11.61	61.36
AT2G17170.1	Thale cress	cytosol	38.28	54.27
AT4G35230.1	Thale cress	cytosol	57.85	52.54
Solyc04g082260.2.1	Tomato	plastid	53.12	49.6
VIT_18s0001g00180.t01	Wine grape	cytosol	53.98	49.41
PGSC0003DMT400025819	Potato	cytosol	52.9	49.4
AT5G59010.1	Thale cress	cytosol	47.96	45.6
AT3G54030.1	Thale cress	plastid	46.24	43.88
AT5G41260.1	Thale cress	cytosol	44.73	42.71
AT1G63500.1	Thale cress	cytosol	44.73	42.71
AT5G46570.1	Thale cress	cytosol	44.73	42.54
AT4G00710.1	Thale cress	cytosol	43.87	41.72
AT1G50990.1	Thale cress	cytosol	44.73	41.03
AT1G01740.2	Thale cress	cytosol	42.58	40.99
AT4G11845.1	Thale cress	cytosol	12.9	39.22
AT5G01060.1	Thale cress	cytosol	40.43	37.68
AT3G09240.3	Thale cress	cytosol	39.57	37.4

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	EntrezGene:816214
ProteinID:AEC06585.1	ArrayExpress:AT2G17090	EnsemblPlantsGene:AT2G17090	RefSeq:AT2G17090	TAIR:AT2G17090	RefSeq:AT2G17090-TAIR-G
EnsemblPlants:AT2G17090.1	TAIR:AT2G17090.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009653	GO:GO:0009719	GO:GO:0009742	GO:GO:0009790	GO:GO:0009898	GO:GO:0009987
GO:GO:0010098	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	GO:GO:0040007	GO:GO:0080159	GO:GO:1902533
InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	RefSeq:NP_179301.1	PFAM:PF07714	PO:PO:0000084
PO:PO:0000200	PO:PO:0000423	PO:PO:0001017	PO:PO:0025195	PO:PO:0025281	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF216	InterPro:Prot_kinase_dom	UniProt:Q7XJT7	SUPFAM:SSF48452	SUPFAM:SSF56112
Symbol:SSP	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0000162342	:	:

Description

BSK12Probable inactive receptor-like kinase SSP [Source:UniProtKB/Swiss-Prot;Acc:Q7XJT7]

Coordinates

chr2:-:7434919..7437314

Molecular Weight (calculated)

52283.9 Da

IEP (calculated)

4.802

GRAVY (calculated)

-0.317

Length

465 amino acids

Sequence
(BLAST)

001: MGCCYSLSST VDPVQDHTTD ASSEPRNGGG EDPPLTKFSF SALKTATNHF SPENIVSDQT SDVVFKGRLQ NGGFVAIKRF NNMAWSDPKL FLEEAQRVGK
101: LRHKRLVNLI GYCCDGDKRF LVADFMANDT LAKRLFQRKY QTMDWSIRLR VAYFVAEALD YCNTAGFASY NNLSAYKVLF DEDGDACLSC FGLMKEINND
201: QITTGSVNPE NVIYRFGTVL VNLLSGKQIP PSHAPEMIHR KNVFKLMDPY LKGKFSIDEA NVVYKLASQC LKYEGQESPN TKEIVATLET LQTRTEAPSY
301: EVVEMTNQEK DASSSSNLSP LGEACLRMDL ASIHSILVLA GYDDDKDIIE LSFEEWIQEV KELQDVRRNG DRAFVEQDFK TAIACYSQFV EERSLVYPSV
401: YARRSLSYLF CDEPEKALLD GMHAQGVFPD WPTAFYLQSV ALAKLDMNTD SADTLKEAAL LEVKK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.