Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70900 | Canola | mitochondrion | 56.91 | 90.03 |
| CDY70772 | Canola | mitochondrion | 56.91 | 90.03 |
| Bra034058.1-P | Field mustard | cytosol | 86.18 | 86.53 |
| CDY22182 | Canola | cytosol | 66.87 | 86.13 |
| CDY69804 | Canola | cytosol | 80.28 | 84.95 |
| CDX73964 | Canola | cytosol | 84.55 | 84.38 |
| Bra029754.1-P | Field mustard | mitochondrion | 83.74 | 83.91 |
| CDY44690 | Canola | mitochondrion | 83.74 | 83.91 |
| CDY07908 | Canola | cytosol | 83.74 | 83.57 |
| Bra001322.1-P | Field mustard | cytosol | 82.32 | 82.32 |
| AT5G01060.1 | Thale cress | cytosol | 81.71 | 80.56 |
| AT3G54030.1 | Thale cress | plastid | 60.57 | 60.82 |
| AT5G59010.1 | Thale cress | cytosol | 59.76 | 60.12 |
| AT5G41260.1 | Thale cress | cytosol | 58.94 | 59.55 |
| AT1G63500.1 | Thale cress | cytosol | 58.74 | 59.34 |
| AT4G00710.1 | Thale cress | cytosol | 58.74 | 59.1 |
| AT1G01740.2 | Thale cress | cytosol | 54.06 | 55.07 |
| AT5G46570.1 | Thale cress | cytosol | 50.81 | 51.12 |
| AT4G35230.1 | Thale cress | cytosol | 50.61 | 48.63 |
| AT1G50990.1 | Thale cress | cytosol | 47.56 | 46.15 |
| AT4G11845.1 | Thale cress | cytosol | 13.01 | 41.83 |
| AT2G17090.1 | Thale cress | cytosol | 37.4 | 39.57 |
| AT2G17170.1 | Thale cress | cytosol | 24.59 | 36.89 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.10 | MapMan:11.3.2.1.5 | MapMan:18.4.1.42 | Gene3D:3.30.200.20 | EntrezGene:820080 |
| UniProt:A0A178VBH8 | UniProt:A0A1I9LLQ2 | ProteinID:ANM63510.1 | ArrayExpress:AT3G09240 | EnsemblPlantsGene:AT3G09240 | RefSeq:AT3G09240 |
| TAIR:AT3G09240 | RefSeq:AT3G09240-TAIR-G | EnsemblPlants:AT3G09240.3 | Unigene:At.53227 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR011990 | InterPro:Kinase-like_dom_sf | RefSeq:NP_001325594.1 |
| ProteinID:OAP03038.1 | PFAM:PF07714 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF201 | InterPro:Prot_kinase_dom |
| SUPFAM:SSF48452 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0007E16144 | SEG:seg |
Description
Kinase with tetratricopeptide repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBH8]
Coordinates
chr3:-:2835381..2838202
Molecular Weight (calculated)
56063.9 Da
IEP (calculated)
5.051
GRAVY (calculated)
-0.326
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCICFKRWR RSSSPSITST ITVIDDLDNK EEDEGSTCPN FLEFSLEQLR VATDGFSADN IVSEHNERVP NIVYKGQLND GRKIAVKRFQ RLSWPDSLEF
101: IEEAQAVGRC RSEHMANLIG CCSEGHERLL VAEYMPNETL AKHLFHWEKR PMKWEMRLRV ALHTATALEY CNDWGIDLYH DLNTYRILFD KVGNPRLSCF
201: GLMKCSREGK SYSTNLAFAP PEYLRLGTVI PESVTFSFGT LLLDLMSGRH IPPNHALDLF RGKNYLVLMD SALDGQFSDE DRTELIHLAS RCLRPEPDER
301: PSIKFLMSAL SRLEKRAELW PNVKEENIPT PSYTEPATKE PLPLTPFGEA CWRVDLSGMH ELLEKLGYGE DDVVVTNEFS FQMWTGQMQE NMDYKKHGDA
401: AFRAKDFETA IEFYTEFMSG APVVSPTVLA RRCLCYLMSD MFREALSDAM QTQVASPEFS IALYLQAACL LKLGMEAEAK EALRHGSSLE AF
101: IEEAQAVGRC RSEHMANLIG CCSEGHERLL VAEYMPNETL AKHLFHWEKR PMKWEMRLRV ALHTATALEY CNDWGIDLYH DLNTYRILFD KVGNPRLSCF
201: GLMKCSREGK SYSTNLAFAP PEYLRLGTVI PESVTFSFGT LLLDLMSGRH IPPNHALDLF RGKNYLVLMD SALDGQFSDE DRTELIHLAS RCLRPEPDER
301: PSIKFLMSAL SRLEKRAELW PNVKEENIPT PSYTEPATKE PLPLTPFGEA CWRVDLSGMH ELLEKLGYGE DDVVVTNEFS FQMWTGQMQE NMDYKKHGDA
401: AFRAKDFETA IEFYTEFMSG APVVSPTVLA RRCLCYLMSD MFREALSDAM QTQVASPEFS IALYLQAACL LKLGMEAEAK EALRHGSSLE AF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.