Factsheet for Bra013030.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02219	Canola	cytosol	99.78	99.36
Bra037282.1-P	Field mustard	cytosol	73.76	73.61
AT2G17090.1	Thale cress	cytosol	64.95	64.95
Bra011596.1-P	Field mustard	cytosol	57.85	52.54
Bra020806.1-P	Field mustard	cytosol	57.2	52.47
Solyc04g082260.2.1	Tomato	plastid	54.41	50.8
PGSC0003DMT400025819	Potato	cytosol	54.41	50.8
VIT_18s0001g00180.t01	Wine grape	cytosol	55.05	50.39
Bra020340.1-P	Field mustard	plastid	47.1	45.91
Bra002599.1-P	Field mustard	cytosol	47.31	44.81
Bra040944.1-P	Field mustard	mitochondrion	28.82	43.93
Bra027800.1-P	Field mustard	cytosol	45.59	43.71
Bra027646.1-P	Field mustard	cytosol	45.59	43.44
Bra004246.1-P	Field mustard	cytosol, plastid	44.73	43.24
Bra014847.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	45.16	42.86
Bra000962.1-P	Field mustard	cytosol	45.16	42.77
Bra037353.1-P	Field mustard	cytosol	44.52	42.77
Bra013274.1-P	Field mustard	cytosol	43.66	40.93
Bra025014.1-P	Field mustard	cytosol	42.58	40.49
Bra034987.1-P	Field mustard	cytosol	13.98	40.12
Bra033237.1-P	Field mustard	cytosol	40.65	38.73
Bra034058.1-P	Field mustard	cytosol	40.0	37.96
Bra001322.1-P	Field mustard	cytosol	40.0	37.8
Bra029754.1-P	Field mustard	mitochondrion	39.35	37.27
Bra009624.1-P	Field mustard	cytosol	38.71	36.66
Bra028886.1-P	Field mustard	cytosol	12.47	32.77

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra013030
EnsemblPlants:Bra013030.1	EnsemblPlants:Bra013030.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004713	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	UniProt:M4D970
PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF216	InterPro:Prot_kinase_dom	SUPFAM:SSF48452
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002540432	:	:

Description

AT2G17090 (E=7e-171) SSP | SSP (SHORT SUSPENSOR); ATP binding / binding / kinase/ protein kinase/ protein tyrosine kinase

Coordinates

chrA03:-:20922518..20924798

Molecular Weight (calculated)

52419.3 Da

IEP (calculated)

4.979

GRAVY (calculated)

-0.334

Length

465 amino acids

Sequence
(BLAST)

001: MGCCNSSPSM EDPPPQNVHQ NHGGSDSQIT KFSFSDLNKA TENFYLKNIV SENGGETSDT VYKGRLHNGG FIAVKKFMNM AWSDSNQFVE EAHRVGKLRH
101: NSVVNLIGYC CDGNERLLVA AFMPNDTLAK RLFHRKNQTM EWEMRLRVAF CVAQALDFCS GGGFTSYNNL NAYSVLFNED GDACLSCFGL MKEFKDDQRA
201: TGSVNSESLI FGFGTLLMNL LSGKQIPPSH APEMIHGKSV VELIDPNLKG KFSAEEATII FKLASQCLQY EDIESLNTKD LVTTLETLHT KTNALSYGML
301: EMAKRQDVSL NQLSTLGDAC LKMDLKAIHK ILVMAEDDKE LVEFSFEEWL EEVKDIQEVR KHGDQAFLEQ DFETAIDCYS QLIESRRMVY PSVYARRCLC
401: YLFCNQPDRA LKDGMVAQQL FPDWPTAFYL QSVALSQLNM ITDSADTLKE ATLLEAKRQH QEKES

Best Arabidopsis Sequence Match ( AT2G17090.1 )
(BLAST)

001: MGCCYSLSST VDPVQDHTTD ASSEPRNGGG EDPPLTKFSF SALKTATNHF SPENIVSDQT SDVVFKGRLQ NGGFVAIKRF NNMAWSDPKL FLEEAQRVGK
101: LRHKRLVNLI GYCCDGDKRF LVADFMANDT LAKRLFQRKY QTMDWSIRLR VAYFVAEALD YCNTAGFASY NNLSAYKVLF DEDGDACLSC FGLMKEINND
201: QITTGSVNPE NVIYRFGTVL VNLLSGKQIP PSHAPEMIHR KNVFKLMDPY LKGKFSIDEA NVVYKLASQC LKYEGQESPN TKEIVATLET LQTRTEAPSY
301: EVVEMTNQEK DASSSSNLSP LGEACLRMDL ASIHSILVLA GYDDDKDIIE LSFEEWIQEV KELQDVRRNG DRAFVEQDFK TAIACYSQFV EERSLVYPSV
401: YARRSLSYLF CDEPEKALLD GMHAQGVFPD WPTAFYLQSV ALAKLDMNTD SADTLKEAAL LEVKK

Arabidopsis Description

BSK12Probable inactive receptor-like kinase SSP [Source:UniProtKB/Swiss-Prot;Acc:Q7XJT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.