Factsheet for Bra028886.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 3
peroxisome 1
plastid 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, peroxisome, plasma membrane, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48109	Canola	plastid	81.92	68.72
Bra009624.1-P	Field mustard	cytosol	78.53	28.31
AT5G01060.1	Thale cress	cytosol	74.01	26.25
Bra034058.1-P	Field mustard	cytosol	66.67	24.08
Bra040944.1-P	Field mustard	mitochondrion	40.11	23.28
Bra029754.1-P	Field mustard	mitochondrion	64.41	23.22
Bra001322.1-P	Field mustard	cytosol	64.41	23.17
Bra027800.1-P	Field mustard	cytosol	55.37	20.21
Bra014847.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	55.93	20.2
Bra002599.1-P	Field mustard	cytosol	55.93	20.16
Bra020340.1-P	Field mustard	plastid	54.24	20.13
Bra027646.1-P	Field mustard	cytosol	54.24	19.67
Bra037353.1-P	Field mustard	cytosol	50.85	18.59
Bra000962.1-P	Field mustard	cytosol	49.72	17.92
Bra033237.1-P	Field mustard	cytosol	48.02	17.42
Bra013274.1-P	Field mustard	cytosol	48.02	17.14
Bra025014.1-P	Field mustard	cytosol	46.33	16.77
Bra020806.1-P	Field mustard	cytosol	48.02	16.77
Bra011596.1-P	Field mustard	cytosol	48.02	16.6
Bra004246.1-P	Field mustard	cytosol, plastid	40.11	14.76
Bra037282.1-P	Field mustard	cytosol	34.46	13.09
Bra013030.1-P	Field mustard	nucleus	32.77	12.47
Bra034987.1-P	Field mustard	cytosol	1.13	1.23
CDY03206	Canola	extracellular, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Bra028886.1	EnsemblPlants:Bra028886.1-P	EnsemblPlantsGene:Bra028886	Gene3D:1.10.510.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR27001	PANTHER:PTHR27001:SF201	SUPFAM:SSF48452
UniParc:UPI0002543635	UniProt:M4EJC0	MapMan:35.1	:	:	:

Description

AT5G01060 (E=1e-019) | protein kinase family protein

Coordinates

chrA02:-:1584241..1585359

Molecular Weight (calculated)

19504.3 Da

IEP (calculated)

5.264

GRAVY (calculated)

-0.198

Length

177 amino acids

Sequence
(BLAST)

001: MKSSHKGKNH STKLAFAPPE YLHLGILIRE SVTYSFGTLL LDLMSGRHIP PNHSASNNLP EKTKPVTEPL KLTPFGDACL RVDLCTIHEL LEKLGYGEED
101: GVAHMHGGAA FRAKDFDTAI ELFTECSAEA LSEAMQAQVG SPEWPIALYL QAVCLFKLDM EAEAKEALRY GSDLEPY

Best Arabidopsis Sequence Match ( AT5G01060.1 )
(BLAST)

001: MGCICFKSWR RSSSSPSITS TVIDDLENVR EYDADDDGGH YPLIFREFSL EQLRIATDGF SAGNIVSEHN DSVPNIVYKG KLGDGRRIAV KRFQRLSWPD
101: PFEFINEAQA VGRLRSEHMA NLIGCCCDDN ERLLVAEYMP NGTLAKHLFH WEKRPMKWEM RLKVALHTAR ALEYCNDKGI DLYHDLNPYR IMFDKTGIPK
201: LSCFGLMKNS HEGKIYSTNL AFAPPEYLRL GTVIAESVTF SFGTLLLDLM SGRHIPPNHA LDLFRGKNYL VLMDSALDGQ FSDEDRTELI HVASRCFKTE
301: PEERPSIKFL KATLSRLQKR AKLCPINVKR PMSPPSKNLP EKTKPATESL KLTPFGDACS RADLSSIHEL LEKLGYEEDN GVGNEFSFQM WTGEMQENMD
401: YKKHGDAAFL AKDFDTAIEF YTEFMTGAPT VSPTVLARRC LCYLMTEMFS EALSDAMQAQ VASPEWPIPL YLQAACLFKL EMEAEAKEAL RHGSALEAY

Arabidopsis Description

Kinase with tetratricopeptide repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LFD0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.