Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73221 | Canola | cytosol | 74.36 | 98.86 |
| CDY13173 | Canola | cytosol | 18.8 | 27.16 |
| CDY13171 | Canola | cytosol | 21.37 | 26.88 |
| CDY07880 | Canola | cytosol | 74.36 | 22.42 |
| Bra037282.1-P | Field mustard | cytosol | 83.76 | 21.03 |
| CDY47487 | Canola | cytosol | 83.76 | 21.03 |
| CDY26795 | Canola | cytosol | 83.76 | 21.03 |
| CDY02219 | Canola | cytosol | 76.92 | 19.27 |
| AT2G17090.1 | Thale cress | cytosol | 63.25 | 15.91 |
| CDY65190 | Canola | cytosol | 36.75 | 13.56 |
| CDX69121 | Canola | cytosol | 55.56 | 12.85 |
| CDX75483 | Canola | cytosol | 55.56 | 12.75 |
| CDY70900 | Canola | mitochondrion | 33.33 | 12.54 |
| CDY70772 | Canola | mitochondrion | 33.33 | 12.54 |
| PGSC0003DMT400025819 | Potato | cytosol | 52.99 | 12.45 |
| Solyc04g082260.2.1 | Tomato | plastid | 52.99 | 12.45 |
| CDX76321 | Canola | cytosol | 53.85 | 12.43 |
| VIT_18s0001g00180.t01 | Wine grape | cytosol | 53.85 | 12.4 |
| CDY17529 | Canola | cytosol | 52.99 | 12.23 |
| CDY48109 | Canola | plastid | 19.66 | 10.9 |
| CDY02851 | Canola | cytosol | 43.59 | 10.43 |
| CDY32670 | Canola | cytosol | 43.59 | 10.43 |
| CDY33003 | Canola | cytosol | 43.59 | 10.39 |
| CDY67218 | Canola | cytosol | 42.73 | 10.18 |
| CDY64092 | Canola | cytosol | 41.03 | 9.9 |
| CDY68942 | Canola | plasma membrane | 41.03 | 9.88 |
| CDY66348 | Canola | cytosol | 40.17 | 9.75 |
| CDY34359 | Canola | cytosol | 40.17 | 9.63 |
| CDY25502 | Canola | cytosol | 40.17 | 9.63 |
| CDY13169 | Canola | cytosol | 40.17 | 9.57 |
| CDX76175 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 39.32 | 9.39 |
| CDY51145 | Canola | cytosol | 38.46 | 9.3 |
| CDY07203 | Canola | cytosol | 38.46 | 9.3 |
| CDX91898 | Canola | cytosol | 38.46 | 9.16 |
| CDX74345 | Canola | cytosol | 38.46 | 9.16 |
| CDX90056 | Canola | cytosol | 37.61 | 9.02 |
| CDX78818 | Canola | cytosol | 37.61 | 8.87 |
| CDY44497 | Canola | cytosol | 37.61 | 8.87 |
| CDY69804 | Canola | cytosol | 35.04 | 8.82 |
| CDX77672 | Canola | cytosol | 35.9 | 8.59 |
| CDY33480 | Canola | cytosol | 35.9 | 8.59 |
| CDY10478 | Canola | mitochondrion | 34.19 | 8.58 |
| CDX73964 | Canola | cytosol | 35.9 | 8.52 |
| CDY15155 | Canola | cytosol | 35.04 | 8.4 |
| CDY44690 | Canola | mitochondrion | 35.04 | 8.35 |
| CDY07908 | Canola | cytosol | 35.04 | 8.32 |
| CDY01839 | Canola | cytosol, plastid | 34.19 | 8.32 |
| CDX96069 | Canola | cytosol, plastid | 34.19 | 8.32 |
| CDY01510 | Canola | cytosol | 33.33 | 8.18 |
| CDY40323 | Canola | cytosol | 34.19 | 8.15 |
| CDY64342 | Canola | extracellular | 2.56 | 4.62 |
| CDY20930 | Canola | extracellular, mitochondrion | 2.56 | 4.48 |
| CDX75149 | Canola | cytosol, mitochondrion, peroxisome | 2.56 | 4.17 |
| CDY12866 | Canola | nucleus | 2.56 | 1.72 |
| CDY03206 | Canola | extracellular, plasma membrane | 0.85 | 1.18 |
| CDY22182 | Canola | cytosol | 2.56 | 0.79 |
| CDY01511 | Canola | cytosol | 0.85 | 0.28 |
| CDX90430 | Canola | cytosol | 0.85 | 0.28 |
Protein Annotations
| EnsemblPlants:CDY66812 | EnsemblPlantsGene:GSBRNA2T00056618001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF216 | ProteinID:CDY66812 | ProteinID:CDY66812.1 |
| SUPFAM:SSF48452 | UniParc:UPI0004EDD2A6 | UniProt:A0A078JN92 | MapMan:35.1 | : | : |
Description
BnaCnng52430DBnaCnng52430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JN92]
Coordinates
chrLK035484:+:1255..1608
Molecular Weight (calculated)
14029.7 Da
IEP (calculated)
5.161
GRAVY (calculated)
-0.342
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLCRRKNKS TDSFEEWMEE VKDIQEVRKH GDQAFLEQDF ETAIHCYSQF IDSRRTVYPS VYARRSLCYL FCNQPDRALY DGMIAQEVFP DWPTAFYLQS
101: VALYIQIKYD HLILLIL
101: VALYIQIKYD HLILLIL
001: MGCCYSLSST VDPVQDHTTD ASSEPRNGGG EDPPLTKFSF SALKTATNHF SPENIVSDQT SDVVFKGRLQ NGGFVAIKRF NNMAWSDPKL FLEEAQRVGK
101: LRHKRLVNLI GYCCDGDKRF LVADFMANDT LAKRLFQRKY QTMDWSIRLR VAYFVAEALD YCNTAGFASY NNLSAYKVLF DEDGDACLSC FGLMKEINND
201: QITTGSVNPE NVIYRFGTVL VNLLSGKQIP PSHAPEMIHR KNVFKLMDPY LKGKFSIDEA NVVYKLASQC LKYEGQESPN TKEIVATLET LQTRTEAPSY
301: EVVEMTNQEK DASSSSNLSP LGEACLRMDL ASIHSILVLA GYDDDKDIIE LSFEEWIQEV KELQDVRRNG DRAFVEQDFK TAIACYSQFV EERSLVYPSV
401: YARRSLSYLF CDEPEKALLD GMHAQGVFPD WPTAFYLQSV ALAKLDMNTD SADTLKEAAL LEVKK
101: LRHKRLVNLI GYCCDGDKRF LVADFMANDT LAKRLFQRKY QTMDWSIRLR VAYFVAEALD YCNTAGFASY NNLSAYKVLF DEDGDACLSC FGLMKEINND
201: QITTGSVNPE NVIYRFGTVL VNLLSGKQIP PSHAPEMIHR KNVFKLMDPY LKGKFSIDEA NVVYKLASQC LKYEGQESPN TKEIVATLET LQTRTEAPSY
301: EVVEMTNQEK DASSSSNLSP LGEACLRMDL ASIHSILVLA GYDDDKDIIE LSFEEWIQEV KELQDVRRNG DRAFVEQDFK TAIACYSQFV EERSLVYPSV
401: YARRSLSYLF CDEPEKALLD GMHAQGVFPD WPTAFYLQSV ALAKLDMNTD SADTLKEAAL LEVKK
Arabidopsis Description
BSK12Probable inactive receptor-like kinase SSP [Source:UniProtKB/Swiss-Prot;Acc:Q7XJT7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.