Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13171 | Canola | cytosol | 49.38 | 43.01 |
| KRH10186 | Soybean | endoplasmic reticulum, extracellular, plastid | 37.04 | 29.13 |
| CDX73221 | Canola | cytosol | 27.16 | 25.0 |
| CDY66812 | Canola | cytosol | 27.16 | 18.8 |
| CDY70900 | Canola | mitochondrion | 39.51 | 10.29 |
| CDY70772 | Canola | mitochondrion | 39.51 | 10.29 |
| CDY65190 | Canola | cytosol | 35.8 | 9.15 |
| CDY13169 | Canola | cytosol | 54.32 | 8.96 |
| CDX76175 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 53.09 | 8.78 |
| CDY48109 | Canola | plastid | 20.99 | 8.06 |
| CDY32670 | Canola | cytosol | 45.68 | 7.57 |
| CDY02851 | Canola | cytosol | 45.68 | 7.57 |
| CDY33003 | Canola | cytosol | 45.68 | 7.54 |
| CDY67218 | Canola | cytosol | 45.68 | 7.54 |
| CDY10478 | Canola | mitochondrion | 40.74 | 7.08 |
| CDY40323 | Canola | cytosol | 40.74 | 6.72 |
| CDY64092 | Canola | cytosol | 39.51 | 6.6 |
| CDY68942 | Canola | plasma membrane | 39.51 | 6.58 |
| CDY69804 | Canola | cytosol | 37.04 | 6.45 |
| CDY66348 | Canola | cytosol | 38.27 | 6.43 |
| CDY34359 | Canola | cytosol | 38.27 | 6.35 |
| CDY25502 | Canola | cytosol | 38.27 | 6.35 |
| CDY44690 | Canola | mitochondrion | 38.27 | 6.31 |
| CDY07908 | Canola | cytosol | 38.27 | 6.29 |
| CDX73964 | Canola | cytosol | 38.27 | 6.29 |
| CDY01839 | Canola | cytosol, plastid | 37.04 | 6.24 |
| CDX96069 | Canola | cytosol, plastid | 37.04 | 6.24 |
| CDY07203 | Canola | cytosol | 37.04 | 6.2 |
| CDY07880 | Canola | cytosol | 29.63 | 6.19 |
| CDX74345 | Canola | cytosol | 37.04 | 6.11 |
| CDX91898 | Canola | cytosol | 37.04 | 6.11 |
| CDY51145 | Canola | cytosol | 35.8 | 5.99 |
| CDY33480 | Canola | cytosol | 34.57 | 5.73 |
| CDX77672 | Canola | cytosol | 34.57 | 5.73 |
| CDX78818 | Canola | cytosol | 34.57 | 5.65 |
| CDY44497 | Canola | cytosol | 34.57 | 5.65 |
| CDY02219 | Canola | cytosol | 32.1 | 5.57 |
| CDY26795 | Canola | cytosol | 30.86 | 5.36 |
| CDY47487 | Canola | cytosol | 30.86 | 5.36 |
| CDX90056 | Canola | cytosol | 32.1 | 5.33 |
| CDY15155 | Canola | cytosol | 32.1 | 5.33 |
| CDX69121 | Canola | cytosol | 30.86 | 4.94 |
| CDX76321 | Canola | cytosol | 30.86 | 4.93 |
| CDX75483 | Canola | cytosol | 30.86 | 4.9 |
| CDY01510 | Canola | cytosol | 28.4 | 4.82 |
| CDY17529 | Canola | cytosol | 29.63 | 4.73 |
| CDY64342 | Canola | extracellular | 1.23 | 1.54 |
| CDY20930 | Canola | extracellular, mitochondrion | 1.23 | 1.49 |
| CDX75149 | Canola | cytosol, mitochondrion, peroxisome | 1.23 | 1.39 |
| CDY22182 | Canola | cytosol | 3.7 | 0.79 |
| CDY12866 | Canola | nucleus | 0.0 | 0.0 |
| CDY03206 | Canola | extracellular, plasma membrane | 0.0 | 0.0 |
| CDY01511 | Canola | cytosol | 0.0 | 0.0 |
| CDX90430 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY13173 | EnsemblPlantsGene:GSBRNA2T00071039001 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF201 | ProteinID:CDY13173 | ProteinID:CDY13173.1 |
| UniParc:UPI0004EF277B | UniProt:A0A078FLP3 | MapMan:35.1 | : | : | : |
Description
BnaC04g26620DBnaC04g26620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLP3]
Coordinates
chrLK032032:+:168342..168810
Molecular Weight (calculated)
9297.5 Da
IEP (calculated)
10.388
GRAVY (calculated)
-0.378
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MMSPTVHARR CLLYVMNENA QEALTDAFEA QVVSPEWPTA LYLKAALLVQ ARHGPMHRKL LNTRCTKHIQ VQDTKPIKKR T
001: MGARCSKFSF CLFPSHFKSA SVLESPDIEN GGKVWPTFKE FKLEQLKSAT GGFSSDNIVS EHGEKAPNVV YRGRLDDGRL IAVKRFNRLA WADHRQFLDE
101: AKAVGSLRSD RLANLIGCCF EGEERLLVAE FMPHETLAKH LFHWENNPMK WAMRLRVALC LAQALEYCSN KGRALYHDLN AYRVLFDKDG NPRLSCFGLM
201: KNSRDGKSYS TNLAFTPPEY LRTGRVTPES VVFSFGTVLL DLMSGKHIPP SHALDLIRGK NCAMLMDSAL EGHFSNEDGT ELVRLATRCL QYEARERPNV
301: KSLVTSLVTL QKESDVASYV LMGIPHETEA EEESPLSLTP FGDACLRVDL TAIQEILSKI GYKDDEGIAN ELSFQMWTNQ MQESLNSKKQ GDLAFRSKDF
401: TTAVDCYTQF IDGGTMVSPT VHARRCLSYL MNDNAQEALT DALQAQVVSP DWPTALYLQA ACLFKLGMEA DAQQALKDGT TLEAKKSNKR
101: AKAVGSLRSD RLANLIGCCF EGEERLLVAE FMPHETLAKH LFHWENNPMK WAMRLRVALC LAQALEYCSN KGRALYHDLN AYRVLFDKDG NPRLSCFGLM
201: KNSRDGKSYS TNLAFTPPEY LRTGRVTPES VVFSFGTVLL DLMSGKHIPP SHALDLIRGK NCAMLMDSAL EGHFSNEDGT ELVRLATRCL QYEARERPNV
301: KSLVTSLVTL QKESDVASYV LMGIPHETEA EEESPLSLTP FGDACLRVDL TAIQEILSKI GYKDDEGIAN ELSFQMWTNQ MQESLNSKKQ GDLAFRSKDF
401: TTAVDCYTQF IDGGTMVSPT VHARRCLSYL MNDNAQEALT DALQAQVVSP DWPTALYLQA ACLFKLGMEA DAQQALKDGT TLEAKKSNKR
Arabidopsis Description
BSK6BSK6 [Source:UniProtKB/TrEMBL;Acc:A0A178VAE8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.