Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G46570.1 | CDX89500 | AT2G22680.1 | 21798944 |
| AT5G46570.1 | CDY25618 | AT2G22680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33480 | Canola | cytosol | 99.8 | 99.8 |
| AT5G46570.1 | Thale cress | cytosol | 94.89 | 94.89 |
| CDX78818 | Canola | cytosol | 85.48 | 84.27 |
| CDY44497 | Canola | cytosol | 85.07 | 83.87 |
| VIT_02s0012g01140.t01 | Wine grape | cytosol | 83.44 | 82.42 |
| KRH57593 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 82.41 | 81.25 |
| KRH04312 | Soybean | cytosol | 81.8 | 80.32 |
| PGSC0003DMT400004190 | Potato | cytosol | 80.37 | 79.88 |
| GSMUA_Achr4P12250_001 | Banana | cytosol | 79.55 | 77.8 |
| GSMUA_Achr11P... | Banana | cytosol | 77.91 | 77.44 |
| GSMUA_Achr4P05600_001 | Banana | cytosol | 77.51 | 77.19 |
| TraesCS1D01G194300.1 | Wheat | cytosol | 78.73 | 76.09 |
| TraesCS1B01G192300.3 | Wheat | cytosol | 78.53 | 75.89 |
| TraesCS1A01G190200.2 | Wheat | cytosol | 78.73 | 75.34 |
| Os10t0571300-01 | Rice | plasma membrane | 78.53 | 75.0 |
| EER94456 | Sorghum | cytosol | 76.89 | 74.46 |
| Zm00001d030021_P001 | Maize | cytosol | 76.28 | 73.86 |
| Zm00001d047053_P004 | Maize | cytosol | 76.28 | 70.11 |
| HORVU1Hr1G049860.2 | Barley | mitochondrion | 78.53 | 66.44 |
| CDY01511 | Canola | cytosol | 46.42 | 64.49 |
| CDY01510 | Canola | cytosol | 61.35 | 62.89 |
| CDX90430 | Canola | cytosol | 45.81 | 62.4 |
| CDY03206 | Canola | extracellular, plasma membrane | 10.63 | 61.18 |
| CDX75149 | Canola | cytosol, mitochondrion, peroxisome | 9.0 | 61.11 |
| CDY32670 | Canola | cytosol | 58.9 | 58.9 |
| CDY33003 | Canola | cytosol | 59.1 | 58.86 |
| CDY02851 | Canola | cytosol | 58.69 | 58.69 |
| CDY07203 | Canola | cytosol | 58.08 | 58.68 |
| CDY65190 | Canola | cytosol | 37.83 | 58.36 |
| CDY67218 | Canola | cytosol | 58.49 | 58.25 |
| CDX91898 | Canola | cytosol | 58.28 | 58.04 |
| CDX74345 | Canola | cytosol | 58.08 | 57.84 |
| CDY68942 | Canola | plasma membrane | 57.46 | 57.82 |
| CDY51145 | Canola | cytosol | 57.06 | 57.64 |
| CDY64092 | Canola | cytosol | 57.06 | 57.53 |
| CDY66348 | Canola | cytosol | 56.65 | 57.47 |
| CDY25502 | Canola | cytosol | 57.06 | 57.17 |
| CDY34359 | Canola | cytosol | 57.06 | 57.17 |
| CDY13169 | Canola | cytosol | 56.65 | 56.42 |
| CDX76175 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 56.03 | 55.92 |
| CDX69121 | Canola | cytosol | 57.46 | 55.53 |
| CDX75483 | Canola | cytosol | 57.26 | 54.9 |
| CDX76321 | Canola | cytosol | 56.85 | 54.83 |
| CDY17529 | Canola | cytosol | 56.44 | 54.44 |
| CDY69804 | Canola | cytosol | 50.31 | 52.9 |
| CDY70772 | Canola | mitochondrion | 33.54 | 52.73 |
| CDY70900 | Canola | mitochondrion | 33.54 | 52.73 |
| CDY15155 | Canola | cytosol | 50.92 | 51.02 |
| CDY22182 | Canola | cytosol | 39.67 | 50.79 |
| CDY44690 | Canola | mitochondrion | 50.92 | 50.71 |
| CDX90056 | Canola | cytosol | 50.1 | 50.2 |
| CDX73964 | Canola | cytosol | 49.08 | 48.68 |
| CDY10478 | Canola | mitochondrion | 46.01 | 48.28 |
| CDY07908 | Canola | cytosol | 48.26 | 47.87 |
| CDY20930 | Canola | extracellular, mitochondrion | 6.54 | 47.76 |
| CDY64342 | Canola | extracellular | 6.34 | 47.69 |
| CDY48109 | Canola | plastid | 20.45 | 47.39 |
| CDY13171 | Canola | cytosol | 9.0 | 47.31 |
| CDX96069 | Canola | cytosol, plastid | 46.42 | 47.19 |
| CDY40323 | Canola | cytosol | 47.24 | 47.05 |
| CDY01839 | Canola | cytosol, plastid | 46.01 | 46.78 |
| CDY12866 | Canola | nucleus | 16.56 | 46.55 |
| CDY07880 | Canola | cytosol | 35.38 | 44.59 |
| CDY26795 | Canola | cytosol | 41.72 | 43.78 |
| CDY47487 | Canola | cytosol | 41.1 | 43.13 |
| CDY02219 | Canola | cytosol | 40.7 | 42.61 |
| CDY66812 | Canola | cytosol | 8.59 | 35.9 |
| CDX73221 | Canola | cytosol | 6.34 | 35.23 |
| CDY13173 | Canola | cytosol | 5.73 | 34.57 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.10 | MapMan:11.3.2.1.5 | MapMan:18.4.1.42 | Gene3D:3.30.200.20 | GO:A0A078CLQ8 |
| EnsemblPlants:CDX77672 | ProteinID:CDX77672 | ProteinID:CDX77672.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00128630001 | InterPro:IPR000719 | InterPro:IPR011990 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFscan:PS50011 |
| PANTHER:PTHR27001 | PANTHER:PTHR27001:SF260 | InterPro:Prot_kinase_dom | SUPFAM:SSF48452 | SUPFAM:SSF56112 | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI0004EBFD4A | : | : | : | : | : |
Description
BnaC07g19260D
Coordinates
chrLK031812:+:702260..704958
Molecular Weight (calculated)
54924.6 Da
IEP (calculated)
5.698
GRAVY (calculated)
-0.406
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCLHSKTAN LPSSDDPSAP TKPESVNGDQ VEQENQNFKE FDLNELRKAT NGFSPSCIVS EGGEKAPNVV YRGKLEGNHL VAIKRFSRQS WPDAQQFVVE
101: ATGVGKLRNK RLVSLIGCCA EGDERLLVAE YMPNDTLSKH LFHWEKQPLP WEMRVRIADY IAQALDHCYN ENRKIYHDLN AYRILFDEEG DPRLSTFGLM
201: KNSRDGKSYS TNLAYTPPEF LRTGRVIPES VIFSYGTILL DLLSGKHIPP THALDIIRGK NALLLMDSSL EGQYESDDAT KLVELASKCL QSEAKERPDT
301: KFLLSAVAPL QKKEEVASHV LMGLPKNAVI LPTMLSPLGK ACSKMDLAAV HDILLKTGYK DEEGAENELS FQEWTQQVQE MLNMKKFGDI AFRDKDFKNS
401: IEYYSKLVGI MPVPSATVFA RRAFSYLMTD QQELALRDAM QAQVCIPEWP TAFYLQALAL SKLGMESDAQ DMLSDGAAYD AKRQNSWRC
101: ATGVGKLRNK RLVSLIGCCA EGDERLLVAE YMPNDTLSKH LFHWEKQPLP WEMRVRIADY IAQALDHCYN ENRKIYHDLN AYRILFDEEG DPRLSTFGLM
201: KNSRDGKSYS TNLAYTPPEF LRTGRVIPES VIFSYGTILL DLLSGKHIPP THALDIIRGK NALLLMDSSL EGQYESDDAT KLVELASKCL QSEAKERPDT
301: KFLLSAVAPL QKKEEVASHV LMGLPKNAVI LPTMLSPLGK ACSKMDLAAV HDILLKTGYK DEEGAENELS FQEWTQQVQE MLNMKKFGDI AFRDKDFKNS
401: IEYYSKLVGI MPVPSATVFA RRAFSYLMTD QQELALRDAM QAQVCIPEWP TAFYLQALAL SKLGMESDAQ DMLSDGAAYD AKRQNSWRC
001: MGCLHSKTAN LPSSDDPSAP NKPESVNGDQ VDQEIQNFKE FELNELRKAT NGFSPSCIVS EGGEKAPNVV YRGKLEGNHL VAIKRFSRQS WPDAQQFVVE
101: ATGVGKLRNK RIVSLIGCCA EGDERLLVAE YMPNDTLSKH LFHWEKQPLP WDMRVRIADY IAEALDYCNI ENRKIYHDLN AYRILFDEEG DPRLSTFGLM
201: KNSRDGKSYS TNLAYTPPEF LRTGRVIPES VIFSYGTILL DLLSGKHIPP SHALDIIRGK NALLLMDSSL EGQYANDDAT KLVDLASKCL QSEAKDRPDT
301: KFLLSAVAPL QKQEEVASHV LMGLPKNTVI LPTMLSPLGK ACAKMDLATF HDILLKTGYR DEEGAENELS FQEWTQQVQE MLNTKKFGDI AFRDKDFKNS
401: IEYYSKLVGM MPVPSATVFA RRAFSYLMTD QQELALRDAM QAQVCIPEWP TAFYLQALAL SKLGMETDAQ DMLNDGAAYD AKRQNSWRC
101: ATGVGKLRNK RIVSLIGCCA EGDERLLVAE YMPNDTLSKH LFHWEKQPLP WDMRVRIADY IAEALDYCNI ENRKIYHDLN AYRILFDEEG DPRLSTFGLM
201: KNSRDGKSYS TNLAYTPPEF LRTGRVIPES VIFSYGTILL DLLSGKHIPP SHALDIIRGK NALLLMDSSL EGQYANDDAT KLVDLASKCL QSEAKDRPDT
301: KFLLSAVAPL QKQEEVASHV LMGLPKNTVI LPTMLSPLGK ACAKMDLATF HDILLKTGYR DEEGAENELS FQEWTQQVQE MLNTKKFGDI AFRDKDFKNS
401: IEYYSKLVGM MPVPSATVFA RRAFSYLMTD QQELALRDAM QAQVCIPEWP TAFYLQALAL SKLGMETDAQ DMLNDGAAYD AKRQNSWRC
Arabidopsis Description
BSK2Serine/threonine-protein kinase BSK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.